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BaseInfo

ncRNA ID	osa-miRf11711-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - UCCUUAAGGAGGUACCAUGAGGUAC - NA
Stem-loop(if miRNA)	A                     CUUUUUC  U      -       C   U      ---     AAUUUUACGGUCCUU AGGAGGUACCAUGAGGUACCA       UA UGUAAA UUUGGUA CUC UGGUAC   AUAGA ||||||||||||||| |||||||||||||||||||||       || |||||| ||||||| ||| ||||||   ||||U UUAAGAUGCCAGGAA UCCUCCAUGGUACUCUAUGGU       AU ACAUUU AAACCAU GAG ACCAUG   UAUCA                C                     -UUUUAA  C      U       A   U      GAG
Stem-loop sequence	AAUUUUACGGUCCUUAAGGAGGUACCAUGAGGUACCACUUUUUCUAUUGUAAAUUUGGUACCUCUUGGUACAUAGAUACUAUGAGGUACCAUGAGAUACCAAAUUUUACACUAAAUUUUUGGUAUCUCAUGGUACCUCCUCAAGGACCGUAGAAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK289087.1	ncRNA:25   CAUGGAGUACCAUGGAGGAAUUCCU   1   ||||||||||||||||||||||||| targets:1936   GUACCUCAUGGUACCUCCUUAAGGA   1960 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090095K03, full insert sequence	NA	coding protein	psRNATarget
AK111036.1	ncRNA:25   CAUGGAGUACCAUGGAGGAAUUCCU   1   ||||||||||||||=|||||||||| targets:734   GUACCUCAUGGUACUUCCUUAAGGA   758 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:002-175-A08, full insert sequence	NA	coding protein	psRNATarget
AK242475.1	ncRNA:25   CAUGGAGUACCAUGGAGGAAUUCCU   1   |||||||||||||||||||*||||| targets:1303   GUACCUCAUGGUACCUCCUCAAGGA   1327 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J080303E02, full insert sequence	NA	coding protein	psRNATarget
AK119399.1	ncRNA:25   CAUGGAGUACCAUGGAGGAAUUCCU   1   |||||||||||||||||||*||||| targets:643   GUACCUCAUGGUACCUCCUCAAGGA   667 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:001-132-D12, full insert sequence	NA	coding protein	psRNATarget
XM_015777564.1	ncRNA:25   CAUGGAGUACCAUGGAGGAAUUCCU   1   |||||||||||||||||||*||||| targets:653   GUACCUCAUGGUACCUCCUCAAGGA   677 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group B3 domain-containing protein Os03g0619600 (LOC4333464), transcript variant X2, mRNA	B3 domain-containing protein Os03g0619600(LOC4333464)	coding protein	psRNATarget
XM_015777563.1	ncRNA:25   CAUGGAGUACCAUGGAGGAAUUCCU   1   |||||||||||||||||||*||||| targets:653   GUACCUCAUGGUACCUCCUCAAGGA   677 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group B3 domain-containing protein Os03g0619600 (LOC4333464), transcript variant X1, mRNA	B3 domain-containing protein Os03g0619600(LOC4333464)	coding protein	psRNATarget
XM_015795910.1	ncRNA:25   CAUGGAGUACCAUGGAGGAAUUCCU   1   |||||||=|||||||||||*||||| targets:64   GUACCUCGUGGUACCUCCUAAAGGA   88 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized protein At1g04910 (LOC9269322), transcript variant X3, mRNA	uncharacterized protein At1g04910(LOC9269322)	coding protein	psRNATarget
XM_015757722.1	ncRNA:23   UGGAGUACCAUGGAGGAAUUCCU   1   ||||||||||||=|||||||||| targets:1   ACCUCAUGGUACUUCCUUAAGGA   23 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group protein PLASTID MOVEMENT IMPAIRED 2 (LOC4325645), mRNA	protein PLASTID MOVEMENT IMPAIRED 2(LOC4325645)	coding protein	psRNATarget
CT831124.1	ncRNA:25   CAUGGAGUACCAUGGAGGAAUUCCU   1   ||||=|*|||||||*|||||||||| targets:2199   GUACUUAAUGGUACAUCCUUAAGGA   2223 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA223M11, full insert sequence	NA	coding protein	psRNATarget
XM_015766438.1	ncRNA:25   CAUGGAGUACCAUGGAGGAAUUCCU   1   ||||=|*|||||||*|||||||||| targets:2210   GUACUUAAUGGUACAUCCUUAAGGA   2234 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4323951 (LOC4323951), mRNA	uncharacterized LOC4323951(LOC4323951)	coding protein	psRNATarget