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BaseInfo

ncRNA ID	ath-miRf10219-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - UACUCGACCAUGGGGUCGAGU - NA
Stem-loop(if miRNA)	AUGG          -    GUGAA     -AA   CUU          A AUACUCGACC    GGUCGAGUGG UGGU     GUGAU   GGC   CUACUCGACC G ||||||||||    |||||||||| ||||     |||||   |||   |||||||||| UGUGAGCUGG    CCAGCUCAUC ACCG     CGCUA   UUG   GGUGAGCUGG G           GGUA          U    --AGG     AAA   UUU          A
Stem-loop sequence	AUACUCGACCAUGGGGUCGAGUGGUGGUGUGAAGUGAUAAGGCCUUCUACUCGACCAGGAGGUCGAGUGGUUUGUUAAAAUCGCGGAGCCAUCUACUCGACCAUGGGGUCGAGUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY231407.1	ncRNA:21   UGAGCUGGGGUACCAGCUCAU   1   ||||||||||||||||||||| targets:537   ACUCGACCCCAUGGUCGAGUA   557 Target Full Sequence	0.0	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
AY231407.1	ncRNA:21   UGAGCUGGGGUACCAGCUCAU   1   ||||||||||=|||||||||| targets:491   ACUCGACCCCGUGGUCGAGUA   511 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
BT025674.1	ncRNA:21   UGAGCUGGGGUACCAGCUCAU   1   ||||||||||*|||||||||| targets:310   ACUCGACCCCCUGGUCGAGUA   330 Target Full Sequence	1.5	Arabidopsis thaliana	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:21   UGAGCUGGGGUACCAGCUCAU   1   ||||||||||*|||||||||| targets:92   ACUCGACCCCCUGGUCGAGUA   112 Target Full Sequence	1.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:21   UGAGCUGGGGUACCAGCUCAU   1   ||||||||||*|||||||||| targets:183   ACUCGACCCCCUGGUCGAGUA   203 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:21   UGAGCUGGGGUACCAGCUCAU   1   ||||||||||*|||||||||| targets:232   ACUCGACCCCCUGGUCGAGUA   252 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:21   UGAGCUGGGGUACCAGCUCAU   1   ||||||||||*|||||||||| targets:183   ACUCGACCCCCUGGUCGAGUA   203 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:21   UGAGCUGGGGUACCAGCUCAU   1   ||||||||||*|||||||||| targets:232   ACUCGACCCCCUGGUCGAGUA   252 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:21   UGAGCUGGGGUACCAGCUCAU   1   ||||||||||*|||||||||| targets:126   ACUCGACCCCCUGGUCGAGUA   146 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:21   UGAGCUGGGGUACCAGCUCAU   1   ||||||||||*|||||||||| targets:501   ACUCGACCCCCUGGUCGAGUA   521 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:21   UGAGCUGGGGUACCAGCUCAU   1   ||||||||||*|||||||||| targets:501   ACUCGACCCCCUGGUCGAGUA   521 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:21   UGAGCUGGGGUACCAGCUCAU   1   ||||||||||*|||||||||| targets:1573   ACUCGACCCCCUGGUCGAGUA   1593 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:21   UGAGCUGGGGUACCAGCUCAU   1   ||*|||||||*|||||||||| targets:585   ACYCGACCCCCUGGUCGAGUA   605 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:21   UGAGCUGGGGUACCAGCUCAU   1   ||||||||||=|||||||||= targets:1211   ACUCGACCCCGUGGUCGAGUG   1231 Target Full Sequence	2.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
BT015478.1	ncRNA:21   UGAGCUGGGGUACCAGCUCAU   1   ||||*|||||*|||||||||| targets:303   ACUCAACCCCCUGGUCGAGUA   323 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:21   UGAGCUGGGGUACCAGCUCAU   1   ||||*|||||*|||||||||| targets:303   ACUCAACCCCCUGGUCGAGUA   323 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:21   UGAGCUGGGGUACCAGCUCAU   1   |*||*|||||=|||||||||| targets:171   AGUCAACCCCGUGGUCGAGUA   191 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:21   UGAGCUGGGGUACCAGCUCAU   1   |*||*|||||=|||||||||| targets:546   AGUCAACCCCGUGGUCGAGUA   566 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:21   UGAGCUGGGGUACCAGCUCAU   1   |*||*|||||=|||||||||| targets:546   AGUCAACCCCGUGGUCGAGUA   566 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget