A ncRNA database for oil producing plants

Search result

ncRNA ID	osa-miRf11706-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - UCCCGGUUGGUACUAUCAACCGGGA - NA
Stem-loop(if miRNA)	G A A AU GAUCUUUA UCCCGGUUGAUA UACCAACCG GACUAAAG U \|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\| A CUAGAAAU AGGGCCAACUAU AUGGUUGGC CUGAUUUC C A C C AC
Stem-loop sequence	GAUCUUUAGUCCCGGUUGAUAAUACCAACCGAGACUAAAGAUUACCACUUUAGUCCCGGUUGGUACUAUCAACCGGGAAUAAAGAUC

Target Acc

Alignment

Exception

Target Description

Target Gene Name

Target Type

Method

AK288424.1

ncRNA:25	AGGGCCAACUAUCAUGGUUGGCCCU	1
	\|\|\|\|\|\|\|\|=\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:1378	CCCCGGUUGGUAAUACCAACCGGGA	1402

2.5

Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence

coding protein

AK061057.1

ncRNA:25	AGGGCCAACUAUCAUGGUUGGCCCU	1
	\|\|==\|\|\|\|\|=\|\|*\|\|\|\|\|\|\|\|\|\|\|\|
targets:362	UCUUGGUUGGUAAUACCAACCGGGA	386

2.5

Oryza sativa Japonica Group cDNA clone:006-205-H07, full insert sequence

coding protein

AK099726.1

ncRNA:25	AGGGCCAACUAUCAUGGUUGGCCCU	1
	\|\|\|\|\|\|\|\|=\|\|\|\|\|\|\|\|\|\|\|\|\|\|
targets:1101	UACCGGUUGGUAGUACCAACCGAGA	1125

2.5

Oryza sativa Japonica Group cDNA clone:J013089E05, full insert sequence

coding protein