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BaseInfo

ncRNA ID	ath-miRf10218-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - CUCGACCAGGAGGUCGAGUG - NA
Stem-loop(if miRNA)	UG  AG          GGG          UGUGA   -- G G UGGUCGGGUGGUGGAGAUGAUGAUACUC UGA  GA  UACUCGACCU   GGUCGAGUGG     UCG  A U A                            G |||  ||  ||||||||||   ||||||||||     |||  | | | AUU  UU  GUGAGCUGGA   CCAGCUCAUC     CCG  A U A                            A    GU  -G          GGA          ---UU   GA - - GUGAAGUGUGGUGGUGAGCUGGGGUACC
Stem-loop sequence	UGAUGGAAGUACUCGACCUGGGGGUCGAGUGGUGUGAUCGAGUGAUGGUCGGGUGGUGGAGAUGAUGAUACUCGACCAUGGGGUCGAGUGGUGGUGUGAAGUGAUAAGGCCUUCUACUCGACCAGGAGGUCGAGUGGUUUGUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EF183005.1	ncRNA:20   GUGAGCUGGAGGACCAGCUC   1   =||||||||||=|||||||| targets:2015   UACUCGACCUCUUGGUCGAG   2034 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:20   GUGAGCUGGAGGACCAGCUC   1   |||||||||*|||||||||| targets:91   CACUCGACCCCCUGGUCGAG   110 Target Full Sequence	1.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:20   GUGAGCUGGAGGACCAGCUC   1   |||||||||*|||||||||| targets:231   CACUCGACCCCCUGGUCGAG   250 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:20   GUGAGCUGGAGGACCAGCUC   1   =||||||||*|||||||||| targets:182   UACUCGACCCCCUGGUCGAG   201 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:20   GUGAGCUGGAGGACCAGCUC   1   |||||||||*|||||||||| targets:231   CACUCGACCCCCUGGUCGAG   250 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:20   GUGAGCUGGAGGACCAGCUC   1   =||||||||*|||||||||| targets:182   UACUCGACCCCCUGGUCGAG   201 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:20   GUGAGCUGGAGGACCAGCUC   1   |||||||||*|||||||||| targets:125   CACUCGACCCCCUGGUCGAG   144 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:20   GUGAGCUGGAGGACCAGCUC   1   |||||||||*|||||||||| targets:500   CACUCGACCCCCUGGUCGAG   519 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:20   GUGAGCUGGAGGACCAGCUC   1   |||||||||*|||||||||| targets:500   CACUCGACCCCCUGGUCGAG   519 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:20   GUGAGCUGGAGGACCAGCUC   1   |||||||||*|||||||||| targets:1572   CACUCGACCCCCUGGUCGAG   1591 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
BT025674.1	ncRNA:20   GUGAGCUGGAGGACCAGCUC   1   =||||||||*|||||||||| targets:309   UACUCGACCCCCUGGUCGAG   328 Target Full Sequence	1.5	Arabidopsis thaliana	NA	coding protein	psRNATarget
BT014714.1	ncRNA:20   GUGAGCUGGAGGACCAGCUC   1   =||||*|||*|||||||||| targets:302   UACUCAACCCCCUGGUCGAG   321 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:20   GUGAGCUGGAGGACCAGCUC   1   =||||*|||*|||||||||| targets:302   UACUCAACCCCCUGGUCGAG   321 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:20   GUGAGCUGGAGGACCAGCUC   1   =||*|||||*|||||||||| targets:584   UACYCGACCCCCUGGUCGAG   603 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget