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BaseInfo

ncRNA ID ath-miRf10217-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 25
Mature sequence(if miRNA) NA - CUACUCGACCGCUGGGUCGAGUGGU - NA
Stem-loop(if miRNA)   UG   A          C           AUGUGAUC    GAUGG     UGA G    U  AGA           GU        - GUGAGGUGAA
GG  AAG CACUCGACCU GUGGUCGAGUG        GAGU     UCAGG   U GAGA GA   CGCUCGACCUC  GGUCGAGU C          G
||  ||| |||||||||| |||||||||||        ||||     |||||   | |||| ||   |||||||||||  |||||||| |          U
CU  UUU GUGAGCUGGG CGCCAGCUCAU        CUCG     AGUUC   A UUCU CU   GUGAGCUGGGG  CCAGCUCA C          U
  GU   G          U           -------C    ----A     UAG G    -  --G           GU        U UUCUGUAGUG
Stem-loop sequence GGUGAAGACACUCGACCUCGUGGUCGAGUGAUGUGAUCGAGUGAUGGUCAGGUGAUGGAGAUGAAGACGCUCGACCUCGUGGUCGAGUCGUGAGGUGAAGUUGUGAUGUCUUCUACUCGACCUGGGGGUCGAGUGGUCUCUUGAGAUCUUGAAGCUCCUACUCGACCGCUGGGUCGAGUGGUUUUGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY227642.1
ncRNA:25   UGGUGAGCUGGGUCGCCAGCUCAUC   1
  ||||||||||||||*||||||||||
targets:762   ACCACUCGACCCAGAGGUCGAGUAG   786

1.5 Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds NA coding protein psRNATarget