ncRNA ID | ath-miRf10217-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 25 |
Mature sequence(if miRNA) | NA - CUACUCGACCGCUGGGUCGAGUGGU - NA |
Stem-loop(if miRNA) |
  UG   A          C           AUGUGAUC    GAUGG     UGA G    U  AGA           GU        - GUGAGGUGAA GG  AAG CACUCGACCU GUGGUCGAGUG        GAGU     UCAGG   U GAGA GA   CGCUCGACCUC  GGUCGAGU C          G ||  ||| |||||||||| |||||||||||        ||||     |||||   | |||| ||   |||||||||||  |||||||| |          U CU  UUU GUGAGCUGGG CGCCAGCUCAU        CUCG     AGUUC   A UUCU CU   GUGAGCUGGGG  CCAGCUCA C          U   GU   G          U           -------C    ----A     UAG G    -  --G           GU        U UUCUGUAGUG |
Stem-loop sequence | GGUGAAGACACUCGACCUCGUGGUCGAGUGAUGUGAUCGAGUGAUGGUCAGGUGAUGGAGAUGAAGACGCUCGACCUCGUGGUCGAGUCGUGAGGUGAAGUUGUGAUGUCUUCUACUCGACCUGGGGGUCGAGUGGUCUCUUGAGAUCUUGAAGCUCCUACUCGACCGCUGGGUCGAGUGGUUUUGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AY227642.1 |
|
1.5 | Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds | NA | coding protein | psRNATarget |