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BaseInfo

ncRNA ID	osa-miRf11688-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - GUACCGUGAGGUACUGGUACCUCGA - NA
Stem-loop(if miRNA)	G   C  A                     --    UG            GGAU AAAAA UAC UC AGGUACCGGUACCUCAUGGUA  AAAU  UUUUCGAUCGUU    C ||||| ||| || |||||||||||||||||||||  ||||  ||||||||||||    U UUUUU AUG AG UCCAUGGUCAUGGAGUGCCAU  UUUA  AAAGGUUAGCAA    A      A   U  C                     GA    GU            AUUG
Stem-loop sequence	AAAAAGUACCUCAAGGUACCGGUACCUCAUGGUAAAAUUGUUUUCGAUCGUUGGAUCUAGUUAAACGAUUGGAAAUGAUUUAGUACCGUGAGGUACUGGUACCUCGAUGUAAUUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ235663.1	ncRNA:25   AGCUCCAUGGUCAUGGAGUGCCAUG   1   ||||||||||=|||||*|||||||| targets:27   UCGAGGUACCGGUACCCCACGGUAC   51 Target Full Sequence	2.5	Sequence 1658 from Patent EP2985353	NA	coding protein	psRNATarget
HI403533.1	ncRNA:25   AGCUCCAUGGUCAUGGAGUGCCAUG   1   ||||||||||=|||||*|||||||| targets:27   UCGAGGUACCGGUACCCCACGGUAC   51 Target Full Sequence	2.5	Sequence 1658 from Patent EP2074227	NA	coding protein	psRNATarget
JB163994.1	ncRNA:25   AGCUCCAUGGUCAUGGAGUGCCAUG   1   ||||||||||=|||||*|||||||| targets:27   UCGAGGUACCGGUACCCCACGGUAC   51 Target Full Sequence	2.5	Sequence 1658 from Patent EP2559767	NA	coding protein	psRNATarget
XM_015786123.1	ncRNA:25   AGCUCCAUGGUCAUGGAGUGCCAUG   1   ||||||||||=*||||||||||||| targets:637   UCGAGGUACCGAUACCUCACGGUAC   661 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4340617 (LOC4340617), mRNA	uncharacterized LOC4340617(LOC4340617)	coding protein	psRNATarget
XM_015760380.1	ncRNA:25   AGCUCCAUGGUCAUGGAGUGCCAUG   1   ||||*|||||=|||||||||||||| targets:1028   UCGAAGUACCGGUACCUCACGGUAC   1052 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group tropinone reductase homolog At5g06060 (LOC4326949), mRNA	tropinone reductase homolog At5g06060(LOC4326949)	coding protein	psRNATarget
AK287529.1	ncRNA:25   AGCUCCAUGGUCAUGGAGUGCCAUG   1   ||||||||||=*||||||||||||| targets:148   UCGAGGUACCGAUACCUCACGGUAC   172 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J065001C03, full insert sequence	NA	coding protein	psRNATarget
AK240791.1	ncRNA:25   AGCUCCAUGGUCAUGGAGUGCCAUG   1   ||||||||||=*||||||||||||| targets:148   UCGAGGUACCGAUACCUCACGGUAC   172 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J065001C03, full insert sequence	NA	coding protein	psRNATarget
LQ236289.1	ncRNA:25   AGCUCCAUGGUCAUGGAGUGCCAUG   1   |||||*|||==|||||||||||||| targets:8   UCGAGUUACUGGUACCUCACGGUAC   32 Target Full Sequence	2.0	Sequence 2284 from Patent EP2985353	NA	coding protein	psRNATarget
JB164620.1	ncRNA:25   AGCUCCAUGGUCAUGGAGUGCCAUG   1   |||||*|||==|||||||||||||| targets:8   UCGAGUUACUGGUACCUCACGGUAC   32 Target Full Sequence	2.0	Sequence 2284 from Patent EP2559767	NA	coding protein	psRNATarget
HI404159.1	ncRNA:25   AGCUCCAUGGUCAUGGAGUGCCAUG   1   |||||*|||==|||||||||||||| targets:8   UCGAGUUACUGGUACCUCACGGUAC   32 Target Full Sequence	2.0	Sequence 2284 from Patent EP2074227	NA	coding protein	psRNATarget
AK100297.1	ncRNA:25   AGCUCCAUGGUCAUGGAGUGCCAUG   1   |||||*||||=*||||||||||||| targets:1309   UCGAGAUACCGAUACCUCACGGUAC   1333 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J023077B14, full insert sequence	NA	coding protein	psRNATarget
XM_015793616.1	ncRNA:25   AGCUCCAUGGUCAUGGAGUGCCAUG   1   |||||*||||=*||||||||||||| targets:1484   UCGAGAUACCGAUACCUCACGGUAC   1508 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group probable auxin efflux carrier component 4 (LOC4346116), mRNA	probable auxin efflux carrier component 4(LOC4346116)	coding protein	psRNATarget
BT131386.1	ncRNA:25   AGCUCCAUGGUCAUGGAGUGCCAUG   1   *||*||||||*|||||||||||||| targets:434   GCGCGGUACCUGUACCUCACGGUAC   458 Target Full Sequence	1.0	Oryza sativa clone RRlibD00936 mRNA sequence	NA	coding protein	psRNATarget
CT833476.1	ncRNA:25   AGCUCCAUGGUCAUGGAGUGCCAUG   1   |=*|||||==|*||||||||||||| targets:950   UUAAGGUAUUAAUACCUCACGGUAC   974 Target Full Sequence	3.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN072I05, full insert sequence	NA	coding protein	psRNATarget
LQ236290.1	ncRNA:19   AUGGUCAUGGAGUGCCAUG   1   |||==|||||||||||||| targets:1   UACUGGUACCUCACGGUAC   19 Target Full Sequence	2.0	Sequence 2285 from Patent EP2985353	NA	coding protein	psRNATarget
JB164621.1	ncRNA:19   AUGGUCAUGGAGUGCCAUG   1   |||==|||||||||||||| targets:1   UACUGGUACCUCACGGUAC   19 Target Full Sequence	2.0	Sequence 2285 from Patent EP2559767	NA	coding protein	psRNATarget
LQ236069.1	ncRNA:19   AUGGUCAUGGAGUGCCAUG   1   ||||=||||=||||||||| targets:1   UACCGGUACUUCACGGUAC   19 Target Full Sequence	2.5	Sequence 2064 from Patent EP2985353	NA	coding protein	psRNATarget
HI404160.1	ncRNA:19   AUGGUCAUGGAGUGCCAUG   1   |||==|||||||||||||| targets:1   UACUGGUACCUCACGGUAC   19 Target Full Sequence	2.0	Sequence 2285 from Patent EP2074227	NA	coding protein	psRNATarget
JB164400.1	ncRNA:19   AUGGUCAUGGAGUGCCAUG   1   ||||=||||=||||||||| targets:1   UACCGGUACUUCACGGUAC   19 Target Full Sequence	2.5	Sequence 2064 from Patent EP2559767	NA	coding protein	psRNATarget
HI403939.1	ncRNA:19   AUGGUCAUGGAGUGCCAUG   1   ||||=||||=||||||||| targets:1   UACCGGUACUUCACGGUAC   19 Target Full Sequence	2.5	Sequence 2064 from Patent EP2074227	NA	coding protein	psRNATarget