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BaseInfo

ncRNA ID	osa-miRf11683-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - UCCCGGUUGGUAAUACCAACCGGGA - NA
Stem-loop(if miRNA)	U   C    A            A  C              A   AUCUUUACU      UCAU   G  U   U  GAU UUUA UCCCGGUUGGUA UA CAACCGGGACUAAA AUC         CUCGGU    CCC UG CAG A  ||| |||| |||||||||||| || |||||||||||||| |||         ||||||    ||| || |||  CUA AAAU AGGGCCAACCAU AU GUUGGCCCUGAUUU UAG         GAGCCG    GGG AC GUC G A   A    C            A  A              C   ---------      ----   G  U   U
Stem-loop sequence	UGAUCUUUAAUCCCGGUUGGUAAUACCAACCGGGACUAAAAAUCAUCUUUACUCUCGGUUCAUCCCGUGUCAGUAGUCUGUCAGGGGGCCGAGGAUCUUUAGUCCCGGUUGAUAAUACCAACCGGGACUAAAAAUCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK289098.1	ncRNA:25   AGGGCCAACCAUAAUGGUUGGCCCU   1   |||||||||||=||||||||||||| targets:156   UCCCGGUUGGUGUUACCAACCGGGA   180 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK289098.1	ncRNA:25   AGGGCCAACCAUAAUGGUUGGCCCU   1   |||||||||||*||||||||||||| targets:113   UCCCGGUUGGUUUUACCAACCGGGA   137 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
XM_015758314.1	ncRNA:25   AGGGCCAACCAUAAUGGUUGGCCCU   1   ||||||||*||=||||||||||||| targets:915   UCCCGGUUUGUGUUACCAACCGGGA   939 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278346 (LOC107278346), transcript variant X1, mRNA	uncharacterized LOC107278346(LOC107278346)	coding protein	psRNATarget
AK288377.1	ncRNA:25   AGGGCCAACCAUAAUGGUUGGCCCU   1   |||||||||||=|||||||||*||| targets:1385   UCCCGGUUGGUGUUACCAACCUGGA   1409 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090026K06, full insert sequence	NA	coding protein	psRNATarget
AK288424.1	ncRNA:25   AGGGCCAACCAUAAUGGUUGGCCCU   1   ||||||||*||=||||||||||||| targets:2390   UCCCGGUUAGUGUUACCAACCGGGA   2414 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
AK288424.1	ncRNA:25   AGGGCCAACCAUAAUGGUUGGCCCU   1   *|||||||||||*|||||||||||| targets:1378   CCCCGGUUGGUAAUACCAACCGGGA   1402 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
AK288796.1	ncRNA:25   AGGGCCAACCAUAAUGGUUGGCCCU   1   |||||||||||=|||||||||||*| targets:1839   UCCCGGUUGGUGUUACCAACCGGAA   1863 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence	NA	coding protein	psRNATarget
AK288405.1	ncRNA:25   AGGGCCAACCAUAAUGGUUGGCCCU   1   ||||*||||||=||||||||||||| targets:2397   UCCCCGUUGGUGUUACCAACCGGGA   2421 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090030E11, full insert sequence	NA	coding protein	psRNATarget
JB164979.1	ncRNA:25   AGGGCCAACCAUAAUGGUUGGCCCU   1   *||||||||||=*|||||||||||| targets:52   CCCCGGUUGGUGCUACCAACCGGGA   76 Target Full Sequence	2.5	Sequence 2643 from Patent EP2559767	NA	coding protein	psRNATarget
LQ236648.1	ncRNA:25   AGGGCCAACCAUAAUGGUUGGCCCU   1   *||||||||||=*|||||||||||| targets:52   CCCCGGUUGGUGCUACCAACCGGGA   76 Target Full Sequence	2.5	Sequence 2643 from Patent EP2985353	NA	coding protein	psRNATarget
HI404518.1	ncRNA:25   AGGGCCAACCAUAAUGGUUGGCCCU   1   *||||||||||=*|||||||||||| targets:52   CCCCGGUUGGUGCUACCAACCGGGA   76 Target Full Sequence	2.5	Sequence 2643 from Patent EP2074227	NA	coding protein	psRNATarget
AK061057.1	ncRNA:25   AGGGCCAACCAUAAUGGUUGGCCCU   1   ||==||||||||*|||||||||||| targets:362   UCUUGGUUGGUAAUACCAACCGGGA   386 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:006-205-H07, full insert sequence	NA	coding protein	psRNATarget