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BaseInfo

ncRNA ID	osa-miRf11678-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - UUCGCGGGUUAACCACUUACA - NA
Stem-loop(if miRNA)	-A            GUC G       -        AACCUG UU   GGGUGUAAGUGG   A CCGCGAA CCCACUUA      C  A   ||||||||||||   | ||||||| ||||||||      |  U   CCUACAUUCACC   U GGCGCUU GGGUGAAU      G  U UC            AAU G       U        -AUCCA UU
Stem-loop sequence	AGGGUGUAAGUGGGUCAGCCGCGAACCCACUUAAACCUGCUUAUUUUGACCUAUAAGUGGGUUUCGCGGGUUAACCACUUACAUCCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK106953.1	ncRNA:21   ACAUUCACCAAUUGGGCGCUU   1   ||||||||||||||||||||| targets:320   UGUAAGUGGUUAACCCGCGAA   340 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:002-119-E06, full insert sequence	NA	coding protein	psRNATarget
AK107859.1	ncRNA:21   ACAUUCACCAAUUGGGCGCUU   1   ||||=||||*||||||||||| targets:827   UGUAGGUGGCUAACCCGCGAA   847 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-134-B05, full insert sequence	NA	coding protein	psRNATarget
XM_015769486.1	ncRNA:21   ACAUUCACCAAUUGGGCGCUU   1   ||||=||||*||||||||||| targets:833   UGUAGGUGGCUAACCCGCGAA   853 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329481 (LOC4329481), mRNA	uncharacterized LOC4329481(LOC4329481)	coding protein	psRNATarget
AK102148.1	ncRNA:21   ACAUUCACCAAUUGGGCGCUU   1   ||||=||||*||||||||||| targets:840   UGUAGGUGGCUAACCCGCGAA   860 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033086C12, full insert sequence	NA	coding protein	psRNATarget
AK108558.1	ncRNA:21   ACAUUCACCAAUUGGGCGCUU   1   |||||*|||||||||||*||| targets:463   UGUAAAUGGUUAACCCGAGAA   483 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-145-A01, full insert sequence	NA	coding protein	psRNATarget
XM_015785563.1	ncRNA:21   ACAUUCACCAAUUGGGCGCUU   1   ||||||*||*||||||||||| targets:1817   UGUAAGCGGCUAACCCGCGAA   1837 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group lysosomal Pro-X carboxypeptidase (LOC4341667), transcript variant X1, mRNA	lysosomal Pro-X carboxypeptidase(LOC4341667)	coding protein	psRNATarget
AK068457.1	ncRNA:21   ACAUUCACCAAUUGGGCGCUU   1   ||||||*||*||||||||||| targets:1814   UGUAAGCGGCUAACCCGCGAA   1834 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013151A14, full insert sequence	NA	coding protein	psRNATarget