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BaseInfo

ncRNA ID osa-miRf11677-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - AGUUGGUGCCCGUCACGGAUGA - NA
Stem-loop(if miRNA)    UG           A   C      CA  A    U        UGG
GAU  UCAUCUGUGAC GGC CCAACU  AG CCCG UUGAGAUA   A
|||  ||||||||||| ||| ||||||  || |||| ||||||||
CUG  AGUAGGCACUG CCG GGUUGA  UC GGGC GACUCUAU   A
   GU           C   U      AA  C    U        UGU
Stem-loop sequence GAUUGUCAUCUGUGACAGGCCCCAACUCAAGACCCGUUUGAGAUAUGGAAUGUUAUCUCAGUCGGGCCUAAAGUUGGUGCCCGUCACGGAUGAUGGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK119390.1
ncRNA:22   AGUAGGCACUGCCCGUGGUUGA   1
  *||||=||||||||||||||=|
targets:3040   CCAUCUGUGACGGGCACCAAUU   3061

2.5 Oryza sativa Japonica Group cDNA clone:001-132-C09, full insert sequence NA coding protein psRNATarget
AK107543.1
ncRNA:22   AGUAGGCACUGCCCGUGGUUGA   1
  |||||=|||||||||*||||||
targets:1632   UCAUCUGUGACGGGCCCCAACU   1653

2.5 Oryza sativa Japonica Group cDNA clone:002-129-H11, full insert sequence NA coding protein psRNATarget
XM_015768179.1
ncRNA:22   AGUAGGCACUGCCCGUGGUUGA   1
  |**||=||||||||||=|||||
targets:431   UACUCUGUGACGGGCAUCAACU   452

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277277 (LOC107277277), mRNA uncharacterized LOC107277277(LOC107277277) coding protein psRNATarget