Search result

BaseInfo

ncRNA ID	osa-miRf11676-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - AAGGAUGUGUCCCAUCCAGU - NA
Stem-loop(if miRNA)	A    A               --A          U       UA ACCUU UAUU GAUGGGACACAUCCU   AUACGACGAA CUGGACA  G ||||| |||| |||||||||||||||   |||||||||| ||||||| UGGAA AUGA CUACCCUGUGUAGGA   UAUGUUGCUU GACCUGU  U      C    C               ACA          U       CC
Stem-loop sequence	ACCUUAUAUUAGAUGGGACACAUCCUAAUACGACGAAUCUGGACAUAGUCCUGUCCAGUUUCGUUGUAUACAAGGAUGUGUCCCAUCCAGUACAAGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015761638.1	ncRNA:20   UGACCUACCCUGUGUAGGAA   1   ==|||||||||||||||||* targets:3896   GUUGGAUGGGACACAUCCUA   3915 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group putative receptor protein kinase ZmPK1 (LOC107278048), mRNA	putative receptor protein kinase ZmPK1(LOC107278048)	coding protein	psRNATarget
JB163960.1	ncRNA:20   UGACCUACCCUGUGUAGGAA   1   |*|||||||||||||||||* targets:2   AGUGGAUGGGACACAUCCUA   21 Target Full Sequence	2.0	Sequence 1624 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235629.1	ncRNA:20   UGACCUACCCUGUGUAGGAA   1   |*|||||||||||||||||* targets:2   AGUGGAUGGGACACAUCCUA   21 Target Full Sequence	2.0	Sequence 1624 from Patent EP2985353	NA	coding protein	psRNATarget
HI403499.1	ncRNA:20   UGACCUACCCUGUGUAGGAA   1   |*|||||||||||||||||* targets:2   AGUGGAUGGGACACAUCCUA   21 Target Full Sequence	2.0	Sequence 1624 from Patent EP2074227	NA	coding protein	psRNATarget
XM_015759388.1	ncRNA:20   UGACCUACCCUGUGUAGGAA   1   ||||||||*||||||||||* targets:404   ACUGGAUGUGACACAUCCUG   423 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group ent-cassadiene C2-hydroxylase-like (LOC4348721), transcript variant X2, mRNA	ent-cassadiene C2-hydroxylase-like(LOC4348721)	coding protein	psRNATarget
XM_015780739.1	ncRNA:20   UGACCUACCCUGUGUAGGAA   1   ||||||||*||||||||||* targets:877   ACUGGAUGUGACACAUCCUA   896 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group UPF0548 protein At2g17695 (LOC4334967), transcript variant X3, mRNA	UPF0548 protein At2g17695(LOC4334967)	coding protein	psRNATarget
XM_015780740.1	ncRNA:20   UGACCUACCCUGUGUAGGAA   1   ||||||||*||||||||||* targets:877   ACUGGAUGUGACACAUCCUA   896 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group UPF0548 protein At2g17695 (LOC4334967), transcript variant X4, mRNA	UPF0548 protein At2g17695(LOC4334967)	coding protein	psRNATarget
XM_015780738.1	ncRNA:20   UGACCUACCCUGUGUAGGAA   1   ||||||||*||||||||||* targets:877   ACUGGAUGUGACACAUCCUA   896 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group UPF0548 protein At2g17695 (LOC4334967), transcript variant X2, mRNA	UPF0548 protein At2g17695(LOC4334967)	coding protein	psRNATarget