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BaseInfo

ncRNA ID osa-miRf11673-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - GCCCGUCACCGAUGACACUCAUC - NA
Stem-loop(if miRNA)      A  CC   A  A       A        A    -----    AUCU
GCCCG CG  GAU AG GUCAUCG UGACGGGC UUCA     GGCC    C
||||| ||  ||| || ||||||| |||||||| ||||     ||||
CGGGC GU  CUA UC CAGUAGC ACUGCCCG AGGU     CCGG    A
     A  AU   C  A       C        -    UUCUU    GCUA
Stem-loop sequence GCCCGACGCCGAUAAGAGUCAUCGAUGACGGGCAUUCAGGCCAUCUCAAUCGGGCCUUCUUUGGAGCCCGUCACCGAUGACACUCAUCUAUGACGGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288447.1
ncRNA:23   CUACUCACAGUAGCCACUGCCCG   1
  |||||||||||||||||||||||
targets:574   GAUGAGUGUCAUCGGUGACGGGC   596

0.0 Oryza sativa Japonica Group cDNA, clone: J090034N03, full insert sequence NA coding protein psRNATarget
AK288447.1
ncRNA:23   CUACUCACAGUAGCCACUGCCCG   1
  *||*||*||||||||||||||||
targets:419   UAUAAGAGUCAUCGGUGACGGGC   441

1.0 Oryza sativa Japonica Group cDNA, clone: J090034N03, full insert sequence NA coding protein psRNATarget
HI404308.1
ncRNA:23   CUACUCACAGUAGCCACUGCCCG   1
  ||||||*||||||||||||||||
targets:109   GAUGAGAGUCAUCGGUGACGGGC   131

1.0 Sequence 2433 from Patent EP2074227 NA coding protein psRNATarget
LQ236438.1
ncRNA:23   CUACUCACAGUAGCCACUGCCCG   1
  ||||||*||||||||||||||||
targets:109   GAUGAGAGUCAUCGGUGACGGGC   131

1.0 Sequence 2433 from Patent EP2985353 NA coding protein psRNATarget
JB164769.1
ncRNA:23   CUACUCACAGUAGCCACUGCCCG   1
  ||||||*||||||||||||||||
targets:109   GAUGAGAGUCAUCGGUGACGGGC   131

1.0 Sequence 2433 from Patent EP2559767 NA coding protein psRNATarget
LQ236502.1
ncRNA:23   CUACUCACAGUAGCCACUGCCCG   1
  ||||=*||||||||||||||||=
targets:129   GAUGGUUGUCAUCGGUGACGGGU   151

3.0 Sequence 2497 from Patent EP2985353 NA coding protein psRNATarget
JB164833.1
ncRNA:23   CUACUCACAGUAGCCACUGCCCG   1
  ||||=*||||||||||||||||=
targets:129   GAUGGUUGUCAUCGGUGACGGGU   151

3.0 Sequence 2497 from Patent EP2559767 NA coding protein psRNATarget
HI404372.1
ncRNA:23   CUACUCACAGUAGCCACUGCCCG   1
  ||||=*||||||||||||||||=
targets:129   GAUGGUUGUCAUCGGUGACGGGU   151

3.0 Sequence 2497 from Patent EP2074227 NA coding protein psRNATarget
AK107543.1
ncRNA:23   CUACUCACAGUAGCCACUGCCCG   1
  |||*=||||||||*|||||||||
targets:1805   GAUAGGUGUCAUCUGUGACGGGC   1827

2.5 Oryza sativa Japonica Group cDNA clone:002-129-H11, full insert sequence NA coding protein psRNATarget