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BaseInfo

ncRNA ID osa-miRf11672-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - GUCUUGUCCCAGUCCCCACUG - NA
Stem-loop(if miRNA) GGA    U     G    -AG          AA       AGGCAG  GUGACCGAU
   UCCA GUCUU UCCC   UCCCCACUGC  CGGCGGG      GG         C
   |||| ||||| ||||   ||||||||||  |||||||      ||
   AGGU CGGAA GGGG   GGGGGUGGCG  GCCGUUC      UA         U
UCA    -     G    AGA          --       ---AUG  GGAGCUUAG
Stem-loop sequence GGAUCCAUGUCUUGUCCCAGUCCCCACUGCAACGGCGGGAGGCAGGGGUGACCGAUCUGAUUCGAGGAUGUACUUGCCGGCGGUGGGGGAGAGGGGGAAGGCUGGAACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK111923.1
ncRNA:21   GUCACCCCUGACCCUGUUCUG   1
  =||||||*=||||||||||||
targets:456   UAGUGGGAGCUGGGACAAGAC   476

2.5 Oryza sativa Japonica Group cDNA clone:001-013-B12, full insert sequence NA coding protein psRNATarget
AK102655.1
ncRNA:21   GUCACCCCUGACCCUGUUCUG   1
  =||||||*=||||||||||||
targets:440   UAGUGGGAGCUGGGACAAGAC   460

2.5 Oryza sativa Japonica Group cDNA clone:J033101G11, full insert sequence NA coding protein psRNATarget
XM_015767009.1
ncRNA:21   GUCACCCCUGACCCUGUUCUG   1
  =||||||*=||||||||||||
targets:481   UAGUGGGAGCUGGGACAAGAC   501

2.5 PREDICTED: Oryza sativa Japonica Group protein RAE1 (LOC4326570), mRNA protein RAE1(LOC4326570) coding protein psRNATarget