ncRNA ID | osa-miRf11672-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - GUCUUGUCCCAGUCCCCACUG - NA |
Stem-loop(if miRNA) |
GGA    U     G    -AG          AA       AGGCAG  GUGACCGAU    UCCA GUCUU UCCC   UCCCCACUGC  CGGCGGG      GG         C    |||| ||||| ||||   ||||||||||  |||||||      ||    AGGU CGGAA GGGG   GGGGGUGGCG  GCCGUUC      UA         U UCA    -     G    AGA          --       ---AUG  GGAGCUUAG |
Stem-loop sequence | GGAUCCAUGUCUUGUCCCAGUCCCCACUGCAACGGCGGGAGGCAGGGGUGACCGAUCUGAUUCGAGGAUGUACUUGCCGGCGGUGGGGGAGAGGGGGAAGGCUGGAACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK111923.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:001-013-B12, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK102655.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J033101G11, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015767009.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group protein RAE1 (LOC4326570), mRNA | protein RAE1(LOC4326570) | coding protein | psRNATarget |