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BaseInfo

ncRNA ID osa-miRf11667-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - GAUGAGUCAUCAGUGACGGGCC - NA
Stem-loop(if miRNA) U    C  U    GA    A     G     A        -C    UUGUCAUCUCA
 UACC UA GGCC  UCAC GAUGA UCAUC GUGACGGG  CUGA           A
 |||| || ||||  |||| ||||| ||||| ||||||||  ||||
 AUGG AU CCGG  AGUG CUACU AGUAG CACUGCCC  CGUA           U
A    C  C    GC    A     G     C        CA    UGAUUACGGGC
Stem-loop sequence UUACCCUAUGGCCGAUCACAGAUGAGUCAUCAGUGACGGGCCUGAUUGUCAUCUCAAUCGGGCAUUAGUAUGCACCCCGUCACCGAUGAGUCAUCAGUGACGGGCCCUACGGUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK068923.1
ncRNA:22   CCGGGCAGUGACUACUGAGUAG   1
  ||||||||||*|||||||||||
targets:1221   GGCCCGUCACAGAUGACUCAUC   1242

1.5 Oryza sativa Japonica Group cDNA clone:J013170A09, full insert sequence NA coding protein psRNATarget
XM_015761270.1
ncRNA:22   CCGGGCAGUGACUACUGAGUAG   1
  |*|*||||||||||||||||||
targets:4   GACACGUCACUGAUGACUCAUC   25

1.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9270068 (LOC9270068), mRNA uncharacterized LOC9270068(LOC9270068) coding protein psRNATarget
AK241950.1
ncRNA:22   CCGGGCAGUGACUACUGAGUAG   1
  **||||||||*|||||||||||
targets:1030   AACCCGUCACAGAUGACUCAUC   1051

1.5 Oryza sativa Japonica Group cDNA, clone: J075091F02, full insert sequence NA coding protein psRNATarget
XM_015763577.1
ncRNA:22   CCGGGCAGUGACUACUGAGUAG   1
  *|*||||||||||*||||||||
targets:1497   UGACCGUCACUGAGGACUCAUC   1518

1.5 PREDICTED: Oryza sativa Japonica Group probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 (LOC107279605), mRNA probably inactive leucine-rich repeat receptor-like protein kinase At2g25790(LOC107279605) coding protein psRNATarget