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BaseInfo

ncRNA ID	osa-miRf11662-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - GCACACCGACGAGGUACCGGU - NA
Stem-loop(if miRNA)	AA    C        GA            ----UGUA   -    C   C CCAGG  GCGG ACACCGAC  GGUACCGGUCGG        GGU CGAG GCG A |||||  |||| ||||||||  ||||||||||||        ||| |||| ||| U GGUCC  UGCU UGUGGCUG  UCGUGGCCAGCU        CCG GCUC UGC U      --    -        -A            UGUAAACC   C    C   U
Stem-loop sequence	CCAGGAAGCGGCACACCGACGAGGUACCGGUCGGUGUAGGUCGAGCGCGCAUUUCGUCCUCGCGCCCCAAAUGUUCGACCGGUGCUAGUCGGUGUUCGUCCUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015783951.1	ncRNA:21   UGGCCAUGGAGCAGCCACACG   1   |||||*|||||||||*||||| targets:1814   ACCGGCACCUCGUCGAUGUGC   1834 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable indole-3-acetic acid-amido synthetase GH3.6 (LOC4337780), mRNA	probable indole-3-acetic acid-amido synthetase GH3.6(LOC4337780)	coding protein	psRNATarget
CT831548.1	ncRNA:21   UGGCCAUGGAGCAGCCACACG   1   |||||*|||||||||*||||| targets:1807   ACCGGCACCUCGUCGAUGUGC   1827 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA221B02, full insert sequence	NA	coding protein	psRNATarget
AK106538.1	ncRNA:21   UGGCCAUGGAGCAGCCACACG   1   |||||*|||||||||*||||| targets:1786   ACCGGCACCUCGUCGAUGUGC   1806 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-108-C10, full insert sequence	NA	coding protein	psRNATarget
XM_015790782.1	ncRNA:21   UGGCCA-UGGAGCAGCCACACG   1   =*||||-=|||||||||||||| targets:323   GACGGUUGCCUCGUCGGUGUGC   344 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4325548 (LOC4325548), mRNA	uncharacterized LOC4325548(LOC4325548)	coding protein	psRNATarget
AK111342.1	ncRNA:21   UGGCCAUGGAGCAGCCACACG   1   **||||*|||||||||*|||| targets:852   CGCGGUUCCUCGUCGGCGUGC   872 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-181-F09, full insert sequence	NA	coding protein	psRNATarget
CT833198.1	ncRNA:21   UGGCCAUGGAGCAGCCACACG   1   **||||*|||||||||*|||| targets:984   CGCGGUUCCUCGUCGGCGUGC   1004 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA055C22, full insert sequence	NA	coding protein	psRNATarget
AK110859.1	ncRNA:21   UGGCCAUGGAGCAGCCACACG   1   =**||*||||||||||||||* targets:131   GGGGGGACCUCGUCGGUGUGG   151 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:002-172-D04, full insert sequence	NA	coding protein	psRNATarget
AK121609.1	ncRNA:21   UGGCCAUGGAGCAGCCACACG   1   =**||*||||||||||||||* targets:98   GGGGGGACCUCGUCGGUGUGG   118 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:J033042L18, full insert sequence	NA	coding protein	psRNATarget