Search result

BaseInfo

ncRNA ID osa-miRf11656-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UUCUCGCUGACGUGGUCGCU - NA
Stem-loop(if miRNA)      AG          - G       UC  GGA    GCCACAGCGAU
GGACG  UUCUCGCUGA C UGGUCGC  GC   GCUG           G
|||||  |||||||||| | |||||||  ||   ||||
CCUGC  AGGAGCGGCU G ACCGGCG  CG   ACCU           G
     AG          A G       CA  --A    CCCCUAGCGGG
Stem-loop sequence GGACGAGUUCUCGCUGACGUGGUCGCUCGCGGAGCUGGCCACAGCGAUGGGGGCGAUCCCCUCCAAGCACGCGGCCAGGAUCGGCGAGGAGACGUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015768291.1
ncRNA:20   UCGCUGGUGCAGUCGCUCUU   1
  ||||=||||*||||||||||
targets:2746   AGCGGCCACAUCAGCGAGAA   2765

2.5 PREDICTED: Oryza sativa Japonica Group ABC transporter B family member 2 (LOC4330390), mRNA ABC transporter B family member 2(LOC4330390) coding protein psRNATarget
AK103774.1
ncRNA:20   UCGCUGGUGCAGUCGCUCUU   1
  ||||=||||*||||||||||
targets:2627   AGCGGCCACAUCAGCGAGAA   2646

2.5 Oryza sativa Japonica Group cDNA clone:J033143M23, full insert sequence NA coding protein psRNATarget
AK106518.1
ncRNA:20   UCGCUGGUGCAGUCGCUCUU   1
  ||||=||||*||||||||||
targets:921   AGCGGCCACAUCAGCGAGAA   940

2.5 Oryza sativa Japonica Group cDNA clone:002-107-C02, full insert sequence NA coding protein psRNATarget
AK107441.1
ncRNA:20   UCGCUGGUGCAGUCGCUCUU   1
  ||=||**|||||||||||||
targets:993   AGUGAAGACGUCAGCGAGAA   1012

3.0 Oryza sativa Japonica Group cDNA clone:002-128-B05, full insert sequence NA coding protein psRNATarget