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BaseInfo

ncRNA ID osa-miRf11651-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - GGAGGUCCCAUGGCAGUAUUU - NA
Stem-loop(if miRNA)                                  ----------A   GUUUUUACUAACG
ACCGUGCAAAGGAGGUCCCAUGGCAGUAUUUGC           CCC             U
|||||||||||||||||||||||||||||||||           |||
UGGUACGUUUUCUCCAGGGUACCGUCAUAAACG           GGC             G
                                 CAGUUUUUUUU   AUGUUGUCCUACG
Stem-loop sequence ACCGUGCAAAGGAGGUCCCAUGGCAGUAUUUGCACCCGUUUUUACUAACGUGGCAUCCUGUUGUACGGUUUUUUUUGACGCAAAUACUGCCAUGGGACCUCUUUUGCAUGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288383.1
ncRNA:21   UUUAUGACGGUACCCUGGAGG   1
  ||||||||||||*||||||||
targets:660   AAAUACUGCCAUCGGACCUCC   680

1.5 Oryza sativa Japonica Group cDNA, clone: J090026P15, full insert sequence NA coding protein psRNATarget
AK241365.1
ncRNA:21   UUUAUGACGGUACCCUGGAGG   1
  |*|||||||||*|||||||||
targets:1125   AUAUACUGCCAAGGGACCUCC   1145

1.5 Oryza sativa Japonica Group cDNA, clone: J065152G13, full insert sequence NA coding protein psRNATarget
XM_015779606.1
ncRNA:21   UUUAUGACGGUACCCUGGAGG   1
  =*|||||||||*|||||||||
targets:51   GUAUACUGCCAAGGGACCUCC   71

1.5 PREDICTED: Oryza sativa Japonica Group peptide methionine sulfoxide reductase A2-2 (LOC107277650), mRNA peptide methionine sulfoxide reductase A2-2(LOC107277650) coding protein psRNATarget