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BaseInfo

ncRNA ID osa-miRf11641-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UCGAGCUUGGUCAAGCUCGA - NA
Stem-loop(if miRNA)    -GA             -                    C    A CU
GUC   GCUCGAGCUUGGU CAAGCUCGAGCCGAGCCUGU AGAA G  U
|||   ||||||||||||| |||||||||||||||||||| |||| |
CGG   CGAGCUCGAGCUA GUUCGAGCUCGGCUCGGAUA UUUU C  G
   AUC             U                    -    A AA
Stem-loop sequence GUCGAGCUCGAGCUUGGUCAAGCUCGAGCCGAGCCUGUCAGAAAGCUUGAACAUUUUAUAGGCUCGGCUCGAGCUUGUAUCGAGCUCGAGCCUAGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK060774.1
ncRNA:20   AGCUCGAACUGGUUCGAGCU   1
  ||*||||||=||||||||||
targets:1193   UCAAGCUUGGCCAAGCUCGA   1212

2.5 Oryza sativa Japonica Group cDNA clone:001-033-B09, full insert sequence NA coding protein psRNATarget
AK065232.1
ncRNA:20   AGCUCGAACUGGUUCGAGCU   1
  ||*||||||=||||||||||
targets:2086   UCAAGCUUGGCCAAGCUCGA   2105

2.5 Oryza sativa Japonica Group cDNA clone:J013002H14, full insert sequence NA coding protein psRNATarget
XM_015775246.1
ncRNA:20   AGCUCGAACUGGUUCGAGCU   1
  ||*||||||=||||||||||
targets:2182   UCAAGCUUGGCCAAGCUCGA   2201

2.5 PREDICTED: Oryza sativa Japonica Group putative clathrin assembly protein At2g25430 (LOC4332409), mRNA putative clathrin assembly protein At2g25430(LOC4332409) coding protein psRNATarget