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BaseInfo

ncRNA ID	ath-miRf10212-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - CUCGACCAGGUGGUCUAGUGGU - NA
Stem-loop(if miRNA)	UG    A G    C      G          ---A     UC      AUGU G UACU GACCAU UGGUCGAGUG    UGUGA  GAGU   |||| | |||| |||||| ||||||||||    |||||  |||G   UGCA U GUGA CUGGUG ACCAGCUCAU    GUACU  CUCA AG    A G    U      G          GGUG     --
Stem-loop sequence	UGAUGUAGGUACUCGACCAUGUGGUCGAGUGAUGUGAUCGAGUGACUCUCAUGGUGGUACUCGACCAGGUGGUCUAGUGGUAACGUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
DQ069808.1	ncRNA:22   UGGUGAUCUGGUGGACCAGCUC   1   ||||||*||||*|||||||||| targets:89   ACCACUCGACCCCCUGGUCGAG   110 Target Full Sequence	2.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
EF183194.1	ncRNA:22   UGGUGAUCUGGUGGACCAGCUC   1   ||||||*|||||||*||||||| targets:448   ACCACUCGACCACCAGGUCGAG   469 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:22   UGGUGAUCUGGUGGACCAGCUC   1   ||||||*||||*|||||||||| targets:123   ACCACUCGACCCCCUGGUCGAG   144 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:22   UGGUGAUCUGGUGGACCAGCUC   1   |=||||*||||||||*|||||| targets:262   AUCACUCGACCACCUUGUCGAG   283 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:22   UGGUGAUCUGGUGGACCAGCUC   1   ||||||*||||*|||||||||| targets:498   ACCACUCGACCCCCUGGUCGAG   519 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:22   UGGUGAUCUGGUGGACCAGCUC   1   |=||||*||||||||*|||||| targets:637   AUCACUCGACCACCUUGUCGAG   658 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:22   UGGUGAUCUGGUGGACCAGCUC   1   ||||||*||||*|||||||||| targets:498   ACCACUCGACCCCCUGGUCGAG   519 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:22   UGGUGAUCUGGUGGACCAGCUC   1   |=||||*||||||||*|||||| targets:637   AUCACUCGACCACCUUGUCGAG   658 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:22   UGGUGAUCUGGUGGACCAGCUC   1   =|||||*||||*|||||||||| targets:229   GCCACUCGACCCCCUGGUCGAG   250 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:22   UGGUGAUCUGGUGGACCAGCUC   1   *|=|||*||||*|||||||||| targets:180   UCUACUCGACCCCCUGGUCGAG   201 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:22   UG-GUGAUCUGGUGGACCAGCUC   1   ||-=|||*|||||||||||||*| targets:100   ACAUACUCGACCACCUGGUCGUG   122 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:22   UGGUGAUCUGGUGGACCAGCUC   1   =|||||*||||*|||||||||| targets:229   GCCACUCGACCCCCUGGUCGAG   250 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:22   UGGUGAUCUGGUGGACCAGCUC   1   *|=|||*||||*|||||||||| targets:180   UCUACUCGACCCCCUGGUCGAG   201 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:22   UG-GUGAUCUGGUGGACCAGCUC   1   ||-=|||*|||||||||||||*| targets:100   ACAUACUCGACCACCUGGUCGUG   122 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:22   UGGUGAUCUGGUGGACCAGCUC   1   |=||||*||||*|||||||||| targets:1570   AUCACUCGACCCCCUGGUCGAG   1591 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget