Search result

BaseInfo

ncRNA ID osa-miRf11637-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - CGGUCAGACCGGCCUGAUGG - NA
Stem-loop(if miRNA)  G     A    -     G    AA     A     --   A
G CGGUC GACC GGCCU AUGG  CGGUC GACCG  GUC C
| ||||| |||| ||||| ||||  ||||| |||||  |||
C GCCAG CUGG CCGGA UACC  GCCAG CUGGC  CAG A
 G     A    U     A    -G     A     GU   U
Stem-loop sequence GGCGGUCAGACCGGCCUGAUGGAACGGUCAGACCGGUCACAUGACUGCGGUCAGACCGGCCAUAAGGCCUGGUCAGACCGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288744.1
ncRNA:20   GGUAGUCCGGCCAGACUGGC   1
  ||=||*||||||||||||||
targets:1974   CCGUCUGGCCGGUCUGACCG   1993

2.0 Oryza sativa Japonica Group cDNA, clone: J090064F20, full insert sequence NA coding protein psRNATarget
AK288744.1
ncRNA:20   GGUAGUCCGGCCAGACUGGC   1
  |||||*||||||||*|||||
targets:1929   CCAUCUGGCCGGUCGGACCG   1948

2.5 Oryza sativa Japonica Group cDNA, clone: J090064F20, full insert sequence NA coding protein psRNATarget
LQ236669.1
ncRNA:20   GGUAGUCCGGCCAGACUGGC   1
  |||*||||||||||*|||||
targets:7   CCACCAGGCCGGUCAGACCG   26

2.5 Sequence 2664 from Patent EP2985353 NA coding protein psRNATarget
LQ235917.1
ncRNA:20   GGUAGUCCGGCCAGACUGGC   1
  |||*||||||||||*|||||
targets:7   CCACCAGGCCGGUCAGACCG   26

2.5 Sequence 1912 from Patent EP2985353 NA coding protein psRNATarget
HI403787.1
ncRNA:20   GGUAGUCCGGCCAGACUGGC   1
  |||*||||||||||*|||||
targets:7   CCACCAGGCCGGUCAGACCG   26

2.5 Sequence 1912 from Patent EP2074227 NA coding protein psRNATarget
JB164248.1
ncRNA:20   GGUAGUCCGGCCAGACUGGC   1
  |||*||||||||||*|||||
targets:7   CCACCAGGCCGGUCAGACCG   26

2.5 Sequence 1912 from Patent EP2559767 NA coding protein psRNATarget
HI404539.1
ncRNA:20   GGUAGUCCGGCCAGACUGGC   1
  |||*||||||||||*|||||
targets:7   CCACCAGGCCGGUCAGACCG   26

2.5 Sequence 2664 from Patent EP2074227 NA coding protein psRNATarget
HI404375.1
ncRNA:20   GGUAGUCCGGCCAGACUGGC   1
  |||*||||||||||*|||||
targets:7   CCACCAGGCCGGUCAGACCG   26

2.5 Sequence 2500 from Patent EP2074227 NA coding protein psRNATarget
JB164326.1
ncRNA:20   GGUAGUCCGGCCAGACUGGC   1
  |||*||||||||||*|||||
targets:7   CCACCAGGCCGGUCAGACCG   26

2.5 Sequence 1990 from Patent EP2559767 NA coding protein psRNATarget
JB164836.1
ncRNA:20   GGUAGUCCGGCCAGACUGGC   1
  |||*||||||||||*|||||
targets:7   CCACCAGGCCGGUCAGACCG   26

2.5 Sequence 2500 from Patent EP2559767 NA coding protein psRNATarget
LQ235995.1
ncRNA:20   GGUAGUCCGGCCAGACUGGC   1
  |||*||||||||||*|||||
targets:7   CCACCAGGCCGGUCAGACCG   26

2.5 Sequence 1990 from Patent EP2985353 NA coding protein psRNATarget
LQ236505.1
ncRNA:20   GGUAGUCCGGCCAGACUGGC   1
  |||*||||||||||*|||||
targets:7   CCACCAGGCCGGUCAGACCG   26

2.5 Sequence 2500 from Patent EP2985353 NA coding protein psRNATarget
HI403865.1
ncRNA:20   GGUAGUCCGGCCAGACUGGC   1
  |||*||||||||||*|||||
targets:7   CCACCAGGCCGGUCAGACCG   26

2.5 Sequence 1990 from Patent EP2074227 NA coding protein psRNATarget
JB165000.1
ncRNA:20   GGUAGUCCGGCCAGACUGGC   1
  |||*||||||||||*|||||
targets:7   CCACCAGGCCGGUCAGACCG   26

2.5 Sequence 2664 from Patent EP2559767 NA coding protein psRNATarget