ncRNA ID | ath-miRf10209-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 23 |
Mature sequence(if miRNA) | NA - AUGGUGGUACUCGGCCAGGUGGU - NA |
Stem-loop(if miRNA) |
-UC       U      A     G  UG  C   UGA     AG   UGGAGGUGAUGAUACUCGA    CUCGACU CCUGGU GAGUG UG  AU GAG   UGGUC  GUG                   C    ||||||| |||||| ||||| ||  || |||   |||||  |||    GAGCUGG GGACCG CUCAU GU  UA CUC   UCAGU  ACU                   C GGU       U      G     G  GG  -   ---     GA   AGUGAAGUGAACUGGUGGA |
Stem-loop sequence | UCCUCGACUUCCUGGUAGAGUGGUGUGAUCGAGUGAUGGUCAGGUGUGGAGGUGAUGAUACUCGACCAGGUGGUCAAGUGAAGUGAUCAAGUGACUCUCAUGGUGGUACUCGGCCAGGUGGUCGAGUGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AY231407.1 |
|
2.0 | Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
BT012022.1 |
|
2.0 | Arabidopsis thaliana At2g10890 mRNA sequence | NA | coding protein | psRNATarget |