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BaseInfo

ncRNA ID ath-miRf10208-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - CUCGACCACAGGGUCGAGUG - NA
Stem-loop(if miRNA)   G          AG             UAG     -      --A    G           UUGGUGGUA  GUGAUCGAGUGAAGGUGAUGUG
CG UACUCGAUCC  GUGGUCGAGUAUC   UCGAG UGAUUG   GAUG UGGUACUCGGC         GA                      G
|| ||||||||||  |||||||||||||   ||||| ||||||   |||| |||||||||||         ||
GU GUGAGCUGGG  CACCAGCUCAUGG   GGUUC GUUGGU   CUAC AUUAUGAGCUG         UA                      U
  G          -A             --U     U      GAG    A           --------G  CACCAGCUCAUAGUAGUGGAGG
Stem-loop sequence CGGUACUCGAUCCAGGUGGUCGAGUAUCUAGUCGAGUGAUUGAGAUGGUGGUACUCGGCUUGGUGGUAGAGUGAUCGAGUGAAGGUGAUGUGGUGGAGGUGAUGAUACUCGACCACAUGGUCGAGUAUUAACAUCGAGUGGUUGUCUUGGUGGUACUCGACCACAGGGUCGAGUGGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY231407.1
ncRNA:20   GUGAGCUGGGACACCAGCUC   1
  ||||||||||*|||||||||
targets:490   CACUCGACCCCGUGGUCGAG   509

1.5 Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds NA coding protein psRNATarget
NM_103391.1
ncRNA:20   GUGAGCUGGGACACCAGCUC   1
  ||||||||||*|||||||||
targets:1210   CACUCGACCCCGUGGUCGAG   1229

1.5 Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA DNAse I-like superfamily protein(AT1G40390) coding protein psRNATarget