ncRNA ID | ath-miRf10208-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - CUCGACCACAGGGUCGAGUG - NA |
Stem-loop(if miRNA) |
  G          AG             UAG     -      --A    G           UUGGUGGUA  GUGAUCGAGUGAAGGUGAUGUG CG UACUCGAUCC  GUGGUCGAGUAUC   UCGAG UGAUUG   GAUG UGGUACUCGGC         GA                      G || ||||||||||  |||||||||||||   ||||| ||||||   |||| |||||||||||         || GU GUGAGCUGGG  CACCAGCUCAUGG   GGUUC GUUGGU   CUAC AUUAUGAGCUG         UA                      U   G          -A             --U     U      GAG    A           --------G  CACCAGCUCAUAGUAGUGGAGG |
Stem-loop sequence | CGGUACUCGAUCCAGGUGGUCGAGUAUCUAGUCGAGUGAUUGAGAUGGUGGUACUCGGCUUGGUGGUAGAGUGAUCGAGUGAAGGUGAUGUGGUGGAGGUGAUGAUACUCGACCACAUGGUCGAGUAUUAACAUCGAGUGGUUGUCUUGGUGGUACUCGACCACAGGGUCGAGUGGUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AY231407.1 |
|
1.5 | Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_103391.1 |
|
1.5 | Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA | DNAse I-like superfamily protein(AT1G40390) | coding protein | psRNATarget |