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BaseInfo

ncRNA ID osa-miRf11592-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - AGACCGGCUGUGCAAUGCCAGUC - NA
Stem-loop(if miRNA)      G   C   CA    G        A     CCG U
CGGUC GAC GGC  UGCA AGCCGGUC GACCG   G C
||||| ||| |||  |||| |||||||| |||||   |
GCCAG CUG CCG  ACGU UCGGCCAG CUGGC   C A
     A   A   UA    G        A     -CA U
Stem-loop sequence CGGUCGGACCGGCCAUGCAGAGCCGGUCAGACCGCCGGUCAUCACCGGUCAGACCGGCUGUGCAAUGCCAGUCAGACCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015794768.1
ncRNA:23   CUGACCGUAACGUGUCGGCCAGA   1
  ||||||=||||||||*|||||||
targets:895   GACUGGUAUUGCACAACCGGUCU   917

2.5 PREDICTED: Oryza sativa Japonica Group BTB/POZ domain-containing protein At1g30440 (LOC4344591), mRNA BTB/POZ domain-containing protein At1g30440(LOC4344591) coding protein psRNATarget
AK100956.1
ncRNA:23   CUGACCGUAACGUGUCGGCCAGA   1
  ||||||=||||||||*|||||||
targets:859   GACUGGUAUUGCACAACCGGUCU   881

2.5 Oryza sativa Japonica Group cDNA clone:J023140F10, full insert sequence NA coding protein psRNATarget