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BaseInfo

ncRNA ID	osa-miRf11590-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - UCCCGGUUGAUAACACCAACCGGGA - NA
Stem-loop(if miRNA)	A               AA    AU  C UAGUCCCGGUUG UAACACCAACCGGGA  AAAG  CG C |||||||||||| |||||||||||||||  ||||  || A AUCAGGGCCAAC AUUGUGGUUGGCUCU  UUUC  GC U             C               CA    --  A
Stem-loop sequence	UAGUCCCGGUUGAUAACACCAACCGGGAAAAAAGAUCGCCAUACGCUUUACUCUCGGUUGGUGUUACCAACCGGGACUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK289098.1	ncRNA:25   AGGGCCAACCACAAUAGUUGGCCCU   1   |||||||||||||||*||||||||| targets:156   UCCCGGUUGGUGUUACCAACCGGGA   180 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK289098.1	ncRNA:25   AGGGCCAACCACAAUAGUUGGCCCU   1   |||||||||||*|||*||||||||| targets:113   UCCCGGUUGGUUUUACCAACCGGGA   137 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK288799.1	ncRNA:25   AGGGCCAACCACAAUAGUUGGCCCU   1   ||||*|||||||||||=|||||||| targets:3416   UCCCAGUUGGUGUUAUUAACCGGGA   3440 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090070K11, full insert sequence	NA	coding protein	psRNATarget
XM_015759969.1	ncRNA:25   AGGGCCAACCACAAUAGUUGGCCCU   1   |*=|||||||||||||=|||||||| targets:2002   UAUCGGUUGGUGUUAUUAACCGGGA   2026 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group F-box/LRR-repeat protein At3g58930 (LOC9269963), transcript variant X3, mRNA	F-box/LRR-repeat protein At3g58930(LOC9269963)	coding protein	psRNATarget
XM_015759968.1	ncRNA:25   AGGGCCAACCACAAUAGUUGGCCCU   1   |*=|||||||||||||=|||||||| targets:3500   UAUCGGUUGGUGUUAUUAACCGGGA   3524 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group F-box/LRR-repeat protein At3g58930 (LOC9269963), transcript variant X1, mRNA	F-box/LRR-repeat protein At3g58930(LOC9269963)	coding protein	psRNATarget
HI404286.1	ncRNA:25   AGGGCCAACCACAAUAGUUGGCCCU   1   ||||||||*||||||||||||*||| targets:51   UCCCGGUUAGUGUUAUCAACCAGGA   75 Target Full Sequence	2.5	Sequence 2411 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236416.1	ncRNA:25   AGGGCCAACCACAAUAGUUGGCCCU   1   ||||||||*||||||||||||*||| targets:51   UCCCGGUUAGUGUUAUCAACCAGGA   75 Target Full Sequence	2.5	Sequence 2411 from Patent EP2985353	NA	coding protein	psRNATarget
JB164747.1	ncRNA:25   AGGGCCAACCACAAUAGUUGGCCCU   1   ||||||||*||||||||||||*||| targets:51   UCCCGGUUAGUGUUAUCAACCAGGA   75 Target Full Sequence	2.5	Sequence 2411 from Patent EP2559767	NA	coding protein	psRNATarget
XM_015758314.1	ncRNA:25   AGGGCCAACCACAAUAGUUGGCCCU   1   ||||||||*||||||*||||||||| targets:915   UCCCGGUUUGUGUUACCAACCGGGA   939 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278346 (LOC107278346), transcript variant X1, mRNA	uncharacterized LOC107278346(LOC107278346)	coding protein	psRNATarget
AK288424.1	ncRNA:25   AGGGCCAACCACAAUAGUUGGCCCU   1   ||||||||*||||||*||||||||| targets:2390   UCCCGGUUAGUGUUACCAACCGGGA   2414 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
AK288405.1	ncRNA:25   AGGGCCAACCACAAUAGUUGGCCCU   1   ||||*||||||||||*||||||||| targets:2397   UCCCCGUUGGUGUUACCAACCGGGA   2421 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090030E11, full insert sequence	NA	coding protein	psRNATarget
AK065811.1	ncRNA:25   AGGGCCAACCACAAUAGUUGGCCCU   1   **||||||*||||||||||||||*| targets:1174   CACCGGUUUGUGUUAUCAACCGGUA   1198 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013039F07, full insert sequence	NA	coding protein	psRNATarget