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BaseInfo

ncRNA ID osa-miRf11587-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - AGAUCGAUCUUUAGUCCCGGUUG - NA
Stem-loop(if miRNA) G    UAA  A                       ACA  AACCGGGAGUAAAGAUGGCUC
 GGAG   AG UCGAUCUUUAGUCCCGGUUGGUA   CC                     A
 ||||   || |||||||||||||||||||||||   ||
 UUUC   UC AGCUAGAAAUCAGGGCCAAUCAU   UC                     G
U    CAG  G                       ---  UACCGAGUCGGCCGGUGCACC
Stem-loop sequence GGGAGUAAAGAUCGAUCUUUAGUCCCGGUUGGUAACACCAACCGGGAGUAAAGAUGGCUCAGCCACGUGGCCGGCUGAGCCAUCUUACUAACCGGGACUAAAGAUCGAGCUGACCUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288796.1
ncRNA:23   GUUGGCCCUGAUUUCUAGCUAGA   1
  =||||||||||||||||||||||
targets:1812   UAACCGGGACUAAAGAUCGAUCU   1834

0.0 Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence NA coding protein psRNATarget
AK288796.1
ncRNA:23   GUUGGCCCUGAUUUCUAGCUAGA   1
  |||||||*||||||||||||*||
targets:1855   CAACCGGAACUAAAGAUCGAGCU   1877

2.5 Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence NA coding protein psRNATarget
AK288167.1
ncRNA:23   GUU----GGCCCUGAUUUCUAGCUAGA   1
  |||----||||||||||||||||||||
targets:1761   CAAAUACCCGGGACUAAAGAUCGAUCU   1787

0.0 Oryza sativa Japonica Group cDNA, clone: J090002K22, full insert sequence NA coding protein psRNATarget
XM_015778766.1
ncRNA:23   GUUGGCCCUGAUUUCUAGCUAGA   1
  =|||||||||||||||||||*||
targets:1041   UAACCGGGACUAAAGAUCGAGCU   1063

1.5 PREDICTED: Oryza sativa Japonica Group jacalin-related lectin 9 (LOC4335495), mRNA jacalin-related lectin 9(LOC4335495) coding protein psRNATarget
AK288463.1
ncRNA:23   GUUGGCCCUGAUUUCUAGCUAGA   1
  ||||||*||||||||||*|||||
targets:625   CAACCGUGACUAAAGAUGGAUCU   647

2.5 Oryza sativa Japonica Group cDNA, clone: J090036E20, full insert sequence NA coding protein psRNATarget
AK288863.1
ncRNA:23   GUUGGCCCUGAUUUCUAGCUAGA   1
  =||||||||*||||||||||||*
targets:1023   UAACCGGGAGUAAAGAUCGAUCA   1045

2.0 Oryza sativa Japonica Group cDNA, clone: J090077I20, full insert sequence NA coding protein psRNATarget