ncRNA ID | osa-miRf11562-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - UACGGCUGCUUAAGACGCCC - NA |
Stem-loop(if miRNA) |
        A       G                        -  GCCUCUUAAGAGAUCCGCAUGAAAAAACAAGGUCAU AUUUUUGC UACGGCU CUUAAGACGCCCGUAUGGAAAAAU GG                                    U |||||||| ||||||| |||||||||||||||||||||||| || UAAAAACG AUGCCGA GAAUUCUGCGGGCAUACCUUUUUA CU                                    U         A       G                        G  AAAAAGAUACGCCCGCGAAUUUACUCGGCGCACGUU |
Stem-loop sequence | AUUUUUGCAUACGGCUGCUUAAGACGCCCGUAUGGAAAAAUGGGCCUCUUAAGAGAUCCGCAUGAAAAAACAAGGUCAUUUUUGCACGCGGCUCAUUUAAGCGCCCGCAUAGAAAAAUCGAUUUUUCCAUACGGGCGUCUUAAGGAGCCGUAAGCAAAAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015779393.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4336558 (LOC4336558), mRNA | uncharacterized LOC4336558(LOC4336558) | coding protein | psRNATarget | |||||||||
AK070729.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J023063M07, full insert sequence | NA | coding protein | psRNATarget |