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BaseInfo

ncRNA ID osa-miRf11562-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UACGGCUGCUUAAGACGCCC - NA
Stem-loop(if miRNA)         A       G                        -  GCCUCUUAAGAGAUCCGCAUGAAAAAACAAGGUCAU
AUUUUUGC UACGGCU CUUAAGACGCCCGUAUGGAAAAAU GG                                    U
|||||||| ||||||| |||||||||||||||||||||||| ||
UAAAAACG AUGCCGA GAAUUCUGCGGGCAUACCUUUUUA CU                                    U
        A       G                        G  AAAAAGAUACGCCCGCGAAUUUACUCGGCGCACGUU
Stem-loop sequence AUUUUUGCAUACGGCUGCUUAAGACGCCCGUAUGGAAAAAUGGGCCUCUUAAGAGAUCCGCAUGAAAAAACAAGGUCAUUUUUGCACGCGGCUCAUUUAAGCGCCCGCAUAGAAAAAUCGAUUUUUCCAUACGGGCGUCUUAAGGAGCCGUAAGCAAAAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015779393.1
ncRNA:20   CCCGCAGAAUUCGUCGGCAU   1
  |||||*|||||||||||*||
targets:1787   GGGCGCCUUAAGCAGCCCUA   1806

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4336558 (LOC4336558), mRNA uncharacterized LOC4336558(LOC4336558) coding protein psRNATarget
AK070729.1
ncRNA:20   CCCGCAGAAUUCGUCGGCAU   1
  |||||*|||||||||||*||
targets:1708   GGGCGCCUUAAGCAGCCCUA   1727

2.5 Oryza sativa Japonica Group cDNA clone:J023063M07, full insert sequence NA coding protein psRNATarget