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BaseInfo

ncRNA ID	osa-miRf11556-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - CGGUCCUUGAGGAGGUACCAUGA - NA
Stem-loop(if miRNA)	CUUUUUU  U      -       C   U     C  AGGU AGCAAUUUUACGGUCCUUGAGGAGGUACCAUGAGGUAUCA       UA UGUAAA UUUGGUA CUC UGGUA CU    A ||||||||||||||||||||||||||||||||||||||||       || |||||| ||||||| ||| ||||| || UCGUUAAGAUGCCAGGAACUCCUCCAUGGUACUCCAUGGU       AU ACAUUU AAACCAU GAG ACCAU GA    C                                         -UUUUAU  C      U       A   U     A  GUAU
Stem-loop sequence	AGCAAUUUUACGGUCCUUGAGGAGGUACCAUGAGGUAUCACUUUUUUUAUUGUAAAUUUGGUACCUCUUGGUACCUAGGUACUAUGAGAUACCAUGAGAUACCAAAUUUUACACUAUAUUUUUGGUACCUCAUGGUACCUCCUCAAGGACCGUAGAAUUGCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288182.1	ncRNA:23   AGUACCAUGGAGGAGUUCCUGGC   1   ||||||||=|||||||||||||| targets:1418   UCAUGGUAUCUCCUCAAGGACCG   1440 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090005J12, full insert sequence	NA	coding protein	psRNATarget
AK289087.1	ncRNA:23   AGUACCAUGGAGGAGUUCCUGGC   1   ||||||||||||||=|||||||| targets:1941   UCAUGGUACCUCCUUAAGGACCG   1963 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090095K03, full insert sequence	NA	coding protein	psRNATarget
AK105471.1	ncRNA:23   AGUACCAUGGAGGAGUUCCUGGC   1   ||||||||||||||||||*|||| targets:1355   UCAUGGUACCUCCUCAAGAACCG   1377 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:001-127-A01, full insert sequence	NA	coding protein	psRNATarget
XM_015765620.1	ncRNA:23   AGUACCAUGGAGGAGUUCCUGGC   1   ||||||||||||||||||*|||| targets:1363   UCAUGGUACCUCCUCAAGAACCG   1385 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 (LOC4324919), transcript variant X1, mRNA	probably inactive leucine-rich repeat receptor-like protein kinase At5g48380(LOC4324919)	coding protein	psRNATarget
XM_015765621.1	ncRNA:23   AGUACCAUGGAGGAGUUCCUGGC   1   ||||||||||||||||||*|||| targets:1381   UCAUGGUACCUCCUCAAGAACCG   1403 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 (LOC4324919), transcript variant X3, mRNA	probably inactive leucine-rich repeat receptor-like protein kinase At5g48380(LOC4324919)	coding protein	psRNATarget
AK065584.1	ncRNA:23   AGUACCAUGGAGGAGUUCCUGGC   1   ||||||||||||||||||*|||| targets:1462   UCAUGGUACCUCCUCAAGAACCG   1484 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013033A03, full insert sequence	NA	coding protein	psRNATarget
AK120403.1	ncRNA:23   AGUACCAUGGAGGAGUUCCUGGC   1   ||||||||||||||||||*|||| targets:1558   UCAUGGUACCUCCUCAAGAACCG   1580 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013088K21, full insert sequence	NA	coding protein	psRNATarget
XM_015782130.1	ncRNA:23   AGUACCAUGGAGGAGUUCCUGGC   1   ||||||||||||||||||*|||| targets:1922   UCAUGGUACCUCCUCAAGAACCG   1944 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group leucine--tRNA ligase, cytoplasmic (LOC9272228), mRNA	leucine--tRNA ligase, cytoplasmic(LOC9272228)	coding protein	psRNATarget
XM_015789833.1	ncRNA:23   AGUACCAUGGAGGAGUUCCUGGC   1   ||||||||=|||||||||*|||| targets:3317   UCAUGGUAUCUCCUCAAGUACCG   3339 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group receptor-like protein 12 (LOC4324067), mRNA	receptor-like protein 12(LOC4324067)	coding protein	psRNATarget
XM_015779910.1	ncRNA:23   AGUACCAUGGAGGAGUUCCUGGC   1   |==||*||||||||||||||*|| targets:544   UUGUGAUACCUCCUCAAGGAACG   566 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group pEARLI1-like lipid transfer protein 1 (LOC9272463), mRNA	pEARLI1-like lipid transfer protein 1(LOC9272463)	coding protein	psRNATarget
AK071292.1	ncRNA:23   AGUACCAUGGAGGAGUUCCUGGC   1   **||||*||||||||||||||*| targets:498   AGAUGGGACCUCCUCAAGGACAG   520 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023088I05, full insert sequence	NA	coding protein	psRNATarget
XM_015757097.1	ncRNA:23   AGUACCAUGGAGGAGUUCCUGGC   1   **||||*||||||||||||||*| targets:625   AGAUGGGACCUCCUCAAGGACAG   647 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group ACT domain-containing protein ACR10 (LOC4347917), transcript variant X1, mRNA	ACT domain-containing protein ACR10(LOC4347917)	coding protein	psRNATarget