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BaseInfo

ncRNA ID ath-miRf10203-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - GGUCGAGUGGUUUGGCAUGAUCA - NA
Stem-loop(if miRNA)       - AG    G     -CU          UG U          UCU   G  
GAAGUG A  UGGU AUGUC   CUACUCGACC  G GGUCGAGUGG   CUU AGA
|||||| |  |||| |||||   ||||||||||  | ||||||||||   ||| ||U
CUUCGC U  ACUA UACGG   GGUGAGCUGG  C CCAGCUCAUC   GAA UUC
      C GG    G     UUU          GU U          CUC   G  
Stem-loop sequence GAAGUGAAGUGGUGAUGUCCUCUACUCGACCUGGUGGUCGAGUGGUCUCUUGAGAUCUUGAAGCUCCUACUCGACCUCUGGGUCGAGUGGUUUGGCAUGAUCAGGUCCGCUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY231407.1
ncRNA:23   ACUAGUACGGUUUGGUGAGCUGG   1
  ||||||||=||||||||||||||
targets:431   UGAUCAUGUCAAACCACUCGACC   453

1.0 Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds NA coding protein psRNATarget
EF183192.1
ncRNA:23   ACUAGUACGGUUUGGUGAGCUGG   1
  ||||||||=||||||||||||||
targets:111   UGAUCAUGUCAAACCACUCGACC   133

1.0 Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence NA coding protein psRNATarget
EF183193.1
ncRNA:23   ACUAGUACGGUUUGGUGAGCUGG   1
  ||||||||=||||||||||||||
targets:486   UGAUCAUGUCAAACCACUCGACC   508

1.0 Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence NA coding protein psRNATarget
EF183191.1
ncRNA:23   ACUAGUACGGUUUGGUGAGCUGG   1
  ||||||||=||||||||||||||
targets:486   UGAUCAUGUCAAACCACUCGACC   508

1.0 Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence NA coding protein psRNATarget
EF183042.1
ncRNA:23   ACUAGUACGGUUUGGUGAGCUGG   1
  ||||||||=||||||||||||||
targets:1513   UGAUCAUGUCAAACCACUCGACC   1535

1.0 Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence NA coding protein psRNATarget
EF183194.1
ncRNA:23   ACUAGUACGGUUUGGUGAGCUGG   1
  ||||||||*||||||||||||||
targets:436   UGAUCAUGACAAACCACUCGACC   458

1.0 Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence NA coding protein psRNATarget
AY227642.1
ncRNA:23   ACUAGUACGGUUUGGUGAGCUGG   1
  ||||||||*||||||||||||||
targets:750   UGAUCAUGACAAACCACUCGACC   772

1.0 Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds NA coding protein psRNATarget
NM_103391.1
ncRNA:23   ACUAGUACGGUUUGGUGAGCUGG   1
  ||||||||=||||*|||||||||
targets:1046   UGAUCAUGUCAAAGCACUCGACC   1068

2.5 Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA DNAse I-like superfamily protein(AT1G40390) coding protein psRNATarget