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BaseInfo

ncRNA ID osa-miRf11544-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - CAUCUGUGACGGGCCACAACU - NA
Stem-loop(if miRNA)      U     ----    C                   AU        UGG
GAUGG CAUCU    GUGA GGGCCACAACUUUAGGCCC  UUGAGAUA   A
||||| |||||    |||| |||||||||||||||||||  ||||||||
CUACU GUGGA    CACU CCCGGUGUUGAAAUCCGGG  AAUUCUAU   A
     -     UAUU    A                   CU        UGU
Stem-loop sequence GAUGGUCAUCUGUGACGGGCCACAACUUUAGGCCCAUUUGAGAUAUGGAAUGUUAUCUUAAUCGGGCCUAAAGUUGUGGCCCAUCACUUAUAGGUGUCAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK068923.1
ncRNA:21   UCAACACCGGGCAGUGUCUAC   1
  |||||**|||||||||||||*
targets:1063   AGUUGCAGCCCGUCACAGAUA   1083

3.0 Oryza sativa Japonica Group cDNA clone:J013170A09, full insert sequence NA coding protein psRNATarget
AK068923.1
ncRNA:21   UCAACACCGGGCAGUGUCUAC   1
  |*||*|*||||||||||||||
targets:1871   AUUUAUUGCCCGUCACAGAUG   1891

2.0 Oryza sativa Japonica Group cDNA clone:J013170A09, full insert sequence NA coding protein psRNATarget
XM_015763577.1
ncRNA:21   UCAACACCGGGCAGUGUCUAC   1
  |*||||**|||||||||||||
targets:1449   ACUUGUCACCCGUCACAGAUG   1469

2.0 PREDICTED: Oryza sativa Japonica Group probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 (LOC107279605), mRNA probably inactive leucine-rich repeat receptor-like protein kinase At2g25790(LOC107279605) coding protein psRNATarget