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BaseInfo

ncRNA ID	osa-miRf11540-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - UUCCAACCGGGACUAAAGUU - NA
Stem-loop(if miRNA)	A  U               UU UUA               AA GAGGA GA CUUUAGUCCCGGUUG  G   CCAACCGGGACUAAA  U ||||| || |||||||||||||||  |   |||||||||||||||  C UUUCU CU GAAAUCAGGGCCAAC  U   GGUUGGCCCUGAUUU  A      A  U               CU UGA               CU
Stem-loop sequence	GAGGAAGAUCUUUAGUCCCGGUUGUUGUUACCAACCGGGACUAAAAAUCAUCUUUAGUCCCGGUUGGAGUUUCCAACCGGGACUAAAGUUCAUCUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288598.1	ncRNA:20   UUGAAAUCAGGGCCAACC-UU   1   =|||||||||||||||||-|| targets:944   GACUUUAGUCCCGGUUGGUAA   964 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J090051P05, full insert sequence	NA	coding protein	psRNATarget
HI403921.1	ncRNA:20   UUGAAAUCAGGGCCAACCUU   1   |*||||||||||||||||=| targets:50   AUCUUUAGUCCCGGUUGGGA   69 Target Full Sequence	2.5	Sequence 2046 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236051.1	ncRNA:20   UUGAAAUCAGGGCCAACCUU   1   |*||||||||||||||||=| targets:50   AUCUUUAGUCCCGGUUGGGA   69 Target Full Sequence	2.5	Sequence 2046 from Patent EP2985353	NA	coding protein	psRNATarget
JB164382.1	ncRNA:20   UUGAAAUCAGGGCCAACCUU   1   |*||||||||||||||||=| targets:50   AUCUUUAGUCCCGGUUGGGA   69 Target Full Sequence	2.5	Sequence 2046 from Patent EP2559767	NA	coding protein	psRNATarget
XM_015790121.1	ncRNA:20   UUGAAAUCAGGGCCAACCUU   1   |*|||||||||||||||||* targets:974   AUCUUUAGUCCCGGUUGGAC   993 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group putative disease resistance protein RGA4 (LOC107281518), transcript variant X2, mRNA	putative disease resistance protein RGA4(LOC107281518)	coding protein	psRNATarget
AK065811.1	ncRNA:20   UUGAAAUCAGGGCCAACCUU   1   |*|||||||||||||||*|| targets:1873   AUCUUUAGUCCCGGUUGAAA   1892 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013039F07, full insert sequence	NA	coding protein	psRNATarget
XM_015755884.1	ncRNA:20   UUGAAAUCAGGGCCAACCUU   1   |*||||||||||||||||*| targets:1375   AUCUUUAGUCCCGGUUGGUA   1394 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group S-norcoclaurine synthase 1 (LOC4346830), mRNA	S-norcoclaurine synthase 1(LOC4346830)	coding protein	psRNATarget
AK288463.1	ncRNA:20   UUGAAAUCAGGGCCAACCUU   1   |*|||||||||||||||*|| targets:426   AUCUUUAGUCCCGGUUGAAA   445 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090036E20, full insert sequence	NA	coding protein	psRNATarget
AK121178.1	ncRNA:20   UUGAAAUCAGGGCCAACCUU   1   |*||||||||||||||||*| targets:1909   AUCUUUAGUCCCGGUUGGUA   1928 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023083G22, full insert sequence	NA	coding protein	psRNATarget
AK288191.1	ncRNA:20   UUGAAAUCAGGGCCAACCUU   1   *||*||||||||||||*||| targets:1481   CACAUUAGUCCCGGUUCGAA   1500 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090007A11, full insert sequence	NA	coding protein	psRNATarget