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BaseInfo

ncRNA ID	ath-miRf10202-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - UCGACCUGGUGGUCGAGUGGU - NA
Stem-loop(if miRNA)	G         U G           -U  A  G A GAGG CACUCGACC C GGGUCGAGUGG  GA GU A G |||| ||||||||| | |||||||||||  || || | U CUCU GUGAGCUGG G UCCAGCUCAUC  CU UA U G     G         U G           UC  G  G G
Stem-loop sequence	GAGGGCACUCGACCUCGGGGUCGAGUGGUGAAGUGAAGUGGUGAUGUCCUCUACUCGACCUGGUGGUCGAGUGGUCUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EF183194.1	ncRNA:21   UGGUGAGCUGGUGGUCCAGCU   1   ||||||||||||||||||||| targets:448   ACCACUCGACCACCAGGUCGA   468 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:21   UGGUGAGCUGGUGGUCCAGCU   1   |||||||||||*||||||||| targets:1103   ACCACUCGACCCCCAGGUCGA   1123 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
NM_103391.1	ncRNA:21   UGGUGAGCUGGUGGUCCAGCU   1   |||||||||||||*||||||| targets:1149   ACCACUCGACCACGAGGUCGA   1169 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
AY227642.1	ncRNA:21   UGGUGAGCUGGUGGUCCAGCU   1   ||||||||||*|||||||||| targets:807   ACCACUCGACAACCAGGUCGA   827 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
EF183042.1	ncRNA:21   UGGUGAGCUGGUGGUCCAGCU   1   |||||||||||||*||||||| targets:1525   ACCACUCGACCACGAGGUCGA   1545 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
BT025674.1	ncRNA:21   UGGUGAGCUGGUGGUCCAGCU   1   *|=||||||||*||||||||| targets:186   UCUACUCGACCCCCAGGUCGA   206 Target Full Sequence	2.5	Arabidopsis thaliana	NA	coding protein	psRNATarget
EF183192.1	ncRNA:21   UGGUGAGCUGGUGGUCCAGCU   1   |=|||||*||||*|||||||| targets:316   AUCACUCUACCAACAGGUCGA   336 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:21   UGGUGAGCUGGUGGUCCAGCU   1   |=|||||*||||*|||||||| targets:364   AUCACUCUACCAACAGGUCGA   384 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:21   UGGUGAGCUGGUGGUCCAGCU   1   |=|||||*||||*|||||||| targets:412   AUCACUCUACCAACAGGUCGA   432 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:21   UGGUGAGCUGGUGGUCCAGCU   1   |=|||||*|||||||*||||| targets:655   AUCACUCUACCACCAAGUCGA   675 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:21   UGGUGAGCUGGUGGUCCAGCU   1   |=|||||*||||*|||||||| targets:691   AUCACUCUACCAACAGGUCGA   711 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:21   UGGUGAGCUGGUGGUCCAGCU   1   |=|||||*||||*|||||||| targets:739   AUCACUCUACCAACAGGUCGA   759 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:21   UGGUGAGCUGGUGGUCCAGCU   1   |=|||||*||||*|||||||| targets:787   AUCACUCUACCAACAGGUCGA   807 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:21   UGGUGAGCUGGUGGUCCAGCU   1   |=|||||*|||||||*||||| targets:1030   AUCACUCUACCACCAAGUCGA   1050 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:21   UGGUGAGCUGGUGGUCCAGCU   1   |=|||||*||||*|||||||| targets:691   AUCACUCUACCAACAGGUCGA   711 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:21   UGGUGAGCUGGUGGUCCAGCU   1   |=|||||*||||*|||||||| targets:739   AUCACUCUACCAACAGGUCGA   759 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:21   UGGUGAGCUGGUGGUCCAGCU   1   |=|||||*||||*|||||||| targets:787   AUCACUCUACCAACAGGUCGA   807 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:21   UGGUGAGCUGGUGGUCCAGCU   1   |=|||||*|||||||*||||| targets:1030   AUCACUCUACCACCAAGUCGA   1050 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
BT012022.1	ncRNA:21   UGGUGAGCUGGUGGUCCAGCU   1   |=|||||*||||*|||||||| targets:33   AUCACUCUACCAACAGGUCGA   53 Target Full Sequence	2.5	Arabidopsis thaliana At2g10890 mRNA sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:21   UGGUGAGCUGGUGGUCCAGCU   1   |||||||*|||||*||||||| targets:43   ACCACUCAACCACAAGGUCGA   63 Target Full Sequence	2.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:21   UGGUGAGCUGGUGGUCCAGCU   1   |=|||||*||||*|||||||| targets:144   AUCACUCUACCAACAGGUCGA   164 Target Full Sequence	2.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget