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BaseInfo

ncRNA ID	osa-miRf11533-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - GAGCCUGGCUUGUCUUGGCUC - NA
Stem-loop(if miRNA)	C                UA     UUG  A  CAU GAG CGAGCCAAGGCAAGCC  GCUUG   CG GC   U ||| ||||||||||||||||  |||||   || || CUU GCUCGGUUCUGUUCGG  CGAGC   GC CG   G    U                UC     CGA  -  AAC
Stem-loop sequence	GAGCCGAGCCAAGGCAAGCCUAGCUUGUUGCGAGCCAUUGCAAGCCGAGCCGAGCCUGGCUUGUCUUGGCUCGUUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015759770.1	ncRNA:21   CUCGGUUCUGUUCGGUCCGAG   1   |||*|||||=||||||||||| targets:1250   GAGACAAGAUAAGCCAGGCUC   1270 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized protein At3g49140 (LOC4350679), transcript variant X2, mRNA	uncharacterized protein At3g49140(LOC4350679)	coding protein	psRNATarget
AK071393.1	ncRNA:21   CUCGGUUCUGUUCGGUCCGAG   1   |||*|||||=||||||||||| targets:1240   GAGACAAGAUAAGCCAGGCUC   1260 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023096A11, full insert sequence	NA	coding protein	psRNATarget
XM_015759769.1	ncRNA:21   CUCGGUUCUGUUCGGUCCGAG   1   |||*|||||=||||||||||| targets:1273   GAGACAAGAUAAGCCAGGCUC   1293 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized protein At3g49140 (LOC4350679), transcript variant X1, mRNA	uncharacterized protein At3g49140(LOC4350679)	coding protein	psRNATarget
AK066017.1	ncRNA:21   CUCGGUUCUGUUCGGUCCGAG   1   |||*|||||=||||||||||| targets:1326   GAGACAAGAUAAGCCAGGCUC   1346 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013050C10, full insert sequence	NA	coding protein	psRNATarget
AK070132.1	ncRNA:21   CUCGGUUCUGUUCGGUCCGAG   1   *|*|||||*|||||||||||| targets:140   AAUCCAAGCCAAGCCAGGCUC   160 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023044D05, full insert sequence	NA	coding protein	psRNATarget
XM_015778765.1	ncRNA:21   CUCGGUUCUGUUCGGUCCGAG   1   *|*|||||*|||||||||||| targets:306   CAUCCAAGCCAAGCCAGGCUC   326 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group UPF0235 protein C15orf40 homolog (LOC4337470), mRNA	UPF0235 protein C15orf40 homolog(LOC4337470)	coding protein	psRNATarget