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BaseInfo

ncRNA ID	ath-miRf10201-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - CUACUCGACCUGGUGGUCGAGUGGU - NA
Stem-loop(if miRNA)	G         U G           -U  A  G A GAGG CACUCGACC C GGGUCGAGUGG  GA GU A G |||| ||||||||| | |||||||||||  || || | U CUCU GUGAGCUGG G UCCAGCUCAUC  CU UA U G     G         U G           UC  G  G G
Stem-loop sequence	GAGGGCACUCGACCUCGGGGUCGAGUGGUGAAGUGAAGUGGUGAUGUCCUCUACUCGACCUGGUGGUCGAGUGGUCUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EF183194.1	ncRNA:25   UGGUGAGCUGGUGGUCCAGCUCAUC   1   ||||||||||||||||||||||||| targets:448   ACCACUCGACCACCAGGUCGAGUAG   472 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:25   UGGUGAGCUGGUGGUCCAGCUCAUC   1   |||||||||||*||||||||||||| targets:1103   ACCACUCGACCCCCAGGUCGAGUAG   1127 Target Full Sequence	1.0	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
AY227642.1	ncRNA:25   UGGUGAGCUGGUGGUCCAGCUCAUC   1   ||||||||||*|||||||||||||| targets:807   ACCACUCGACAACCAGGUCGAGUAG   831 Target Full Sequence	1.0	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
EF183042.1	ncRNA:25   UGGUGAGCUGGUGGUCCAGCUCAUC   1   |||||||||||||*||||||||||| targets:1525   ACCACUCGACCACGAGGUCGAGUAG   1549 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
BT025674.1	ncRNA:25   UGGUGAGCUGGUGGUCCAGCUCAUC   1   *|=||||||||*||||||||||||* targets:186   UCUACUCGACCCCCAGGUCGAGUAA   210 Target Full Sequence	2.0	Arabidopsis thaliana	NA	coding protein	psRNATarget
EF183042.1	ncRNA:25   UGGUGAGCUGGUGGUCCAGCUCAUC   1   |=|||||||||*||*|||||||||| targets:1570   AUCACUCGACCCCCUGGUCGAGUAG   1594 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:25   UGGUGAGCUGGUGGUCCAGCUCAUC   1   |||||||*|||||*||||||||||| targets:43   ACCACUCAACCACAAGGUCGAGUAG   67 Target Full Sequence	2.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:25   UGGUGAGCUGGUGGUCCAGCUCAUC   1   |||||||||||*||*|||||||||| targets:89   ACCACUCGACCCCCUGGUCGAGUAG   113 Target Full Sequence	2.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:25   UGGUGAGCUGGUGGUCCAGCUCAUC   1   |||||||||||*||*|||||||||| targets:123   ACCACUCGACCCCCUGGUCGAGUAG   147 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:25   UGGUGAGCUGGUGGUCCAGCUCAUC   1   |||||||||||*||*|||||||||| targets:498   ACCACUCGACCCCCUGGUCGAGUAG   522 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:25   UGGUGAGCUGGUGGUCCAGCUCAUC   1   |||||||||||*||*|||||||||| targets:498   ACCACUCGACCCCCUGGUCGAGUAG   522 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget