Search result

BaseInfo

ncRNA ID osa-miRf11526-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - CGAGCUCGAAUAGCUCGUCG - NA
Stem-loop(if miRNA) GA      -       C              CUGU  A  C  CUCGAGCUCGAUUCGUCAACAAUUUGA
  GGCUCG CGAGCUG UUGAGCUUGGCUCG    AG CU GG                           G
  |||||| ||||||| ||||||||||||||    || || ||                           C
  CCGAGC GCUCGAU AGCUCGAGCCGAGC    GU UC GA                           C
-C      U       A              ---A  -  -  GCGUUCGAACCUCGAUCCGAACUCAAG
Stem-loop sequence GAGGCUCGCGAGCUGCUUGAGCUUGGCUCGCUGUAGACUCGGCUCGAGCUCGAUUCGUCAACAAUUUGAGCCGAACUCAAGCCUAGCUCCAAGCUUGCGAGCUUGACGAGCCGAGCUCGAAUAGCUCGUCGAGCCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015764104.1
ncRNA:20   GCUGCUCGAUAAGCUCGAGC   1
  |||||||||=||||||||||
targets:190   CGACGAGCUGUUCGAGCUCG   209

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107276805 (LOC107276805), mRNA uncharacterized LOC107276805(LOC107276805) coding protein psRNATarget