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BaseInfo

ncRNA ID osa-miRf11525-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 24
Mature sequence(if miRNA) NA - CUCGCGAGCUGCUUGAGCUUGGCU - NA
Stem-loop(if miRNA)   GA      -       C              CUGU  A  C  CUCGAGCUCGAUUCGUCAACAAUUUGA
UC  GGCUCG CGAGCUG UUGAGCUUGGCUCG    AG CU GG                           G
||  |||||| ||||||| ||||||||||||||    || || ||                           C
AG  CCGAGC GCUCGAU AGCUCGAGCCGAGC    GU UC GA                           C
  AC      U       A              ---A  -  -  GCGUUCGAACCUCGAUCCGAACUCAAG
Stem-loop sequence UCGAGGCUCGCGAGCUGCUUGAGCUUGGCUCGCUGUAGACUCGGCUCGAGCUCGAUUCGUCAACAAUUUGAGCCGAACUCAAGCCUAGCUCCAAGCUUGCGAGCUUGACGAGCCGAGCUCGAAUAGCUCGUCGAGCCCAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015784053.1
ncRNA:24   UCGGUUCGAGUUCGUCGAGC-GCUC   1
  ||||=|||||||||||||||-||||
targets:505   AGCCGAGCUCAAGCAGCUCGACGAG   529

3.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9268468 (LOC9268468), mRNA uncharacterized LOC9268468(LOC9268468) coding protein psRNATarget
AK288080.1
ncRNA:24   UCGGUUCGAGUUCGUCGAGC-GCUC   1
  ||||=|||||||||||||||-||||
targets:481   AGCCGAGCUCAAGCAGCUCGACGAG   505

3.0 Oryza sativa Japonica Group cDNA, clone: J075166J19, full insert sequence NA coding protein psRNATarget
AK240999.1
ncRNA:24   UCGGUUCGAGUUCGUCGAGCGCUC   1
  ||*|=*|||||||*||||||||||
targets:4217   AGGCGUGCUCAAGAAGCUCGCGAG   4240

2.5 Oryza sativa Japonica Group cDNA, clone: J065053C05, full insert sequence NA coding protein psRNATarget
BT130473.1
ncRNA:24   UCGGUUCGAGUUCGUCGAGCGCUC   1
  ||*|=*|||||||*||||||||||
targets:477   AGGCGUGCUCAAGAAGCUCGCGAG   500

2.5 Oryza sativa clone RRlibC00856 mRNA sequence NA coding protein psRNATarget
XM_015765139.1
ncRNA:24   UCGGUUCGAGUUCGUCGAGCGCUC   1
  ***||||||*||||||||*|||||
targets:729   CUACAAGCUGAAGCAGCUGGCGAG   752

2.5 PREDICTED: Oryza sativa Japonica Group protein RTF1 homolog (LOC4352419), mRNA protein RTF1 homolog(LOC4352419) coding protein psRNATarget