ncRNA ID | osa-miRf11525-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 24 |
Mature sequence(if miRNA) | NA - CUCGCGAGCUGCUUGAGCUUGGCU - NA |
Stem-loop(if miRNA) |
  GA      -       C              CUGU  A  C  CUCGAGCUCGAUUCGUCAACAAUUUGA UC  GGCUCG CGAGCUG UUGAGCUUGGCUCG    AG CU GG                           G ||  |||||| ||||||| ||||||||||||||    || || ||                           C AG  CCGAGC GCUCGAU AGCUCGAGCCGAGC    GU UC GA                           C   AC      U       A              ---A  -  -  GCGUUCGAACCUCGAUCCGAACUCAAG |
Stem-loop sequence | UCGAGGCUCGCGAGCUGCUUGAGCUUGGCUCGCUGUAGACUCGGCUCGAGCUCGAUUCGUCAACAAUUUGAGCCGAACUCAAGCCUAGCUCCAAGCUUGCGAGCUUGACGAGCCGAGCUCGAAUAGCUCGUCGAGCCCAGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015784053.1 |
|
3.0 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9268468 (LOC9268468), mRNA | uncharacterized LOC9268468(LOC9268468) | coding protein | psRNATarget | |||||||||
AK288080.1 |
|
3.0 | Oryza sativa Japonica Group cDNA, clone: J075166J19, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK240999.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J065053C05, full insert sequence | NA | coding protein | psRNATarget | |||||||||
BT130473.1 |
|
2.5 | Oryza sativa clone RRlibC00856 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_015765139.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group protein RTF1 homolog (LOC4352419), mRNA | protein RTF1 homolog(LOC4352419) | coding protein | psRNATarget |