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BaseInfo

ncRNA ID	osa-miRf11521-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - GGUCACAUCCCCUCCUAGGU - NA
Stem-loop(if miRNA)	U          A            C       ----UC  --G       ACC AAAAGAA CGACCUAGGA GGGAUGUGACCC UCCUAGG      UA   GGAUGUG   C ||||||| |||||||||| |||||||||||| |||||||      ||   ||||||| UUUUCUU GUUGGAUCCU CCCUACACUGGG AGGGUCU      AU   CCUAUAU   C        C          C            A       UAUUAC  ACA       CCU
Stem-loop sequence	AAAAGAAUCGACCUAGGAAGGGAUGUGACCCCUCCUAGGUCUAGGGAUGUGACCCCUCCUAUAUCCACAUACAUUAUUCUGGGAAGGGUCACAUCCCCUCCUAGGUUGCUUCUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK106562.1	ncRNA:20   UGGAUCCUCCCCUACACUGG   1   |*|||||||||||||||||| targets:1061   AGCUAGGAGGGGAUGUGACC   1080 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:002-110-C07, full insert sequence	NA	coding protein	psRNATarget
XM_015755190.1	ncRNA:20   UGGAUCCUCCCCUACACUGG   1   ||*||||||||||||||||| targets:1900   ACAUAGGAGGGGAUGUGACC   1919 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group cytochrome P450 78A9 (LOC4347650), mRNA	cytochrome P450 78A9(LOC4347650)	coding protein	psRNATarget
AK288796.1	ncRNA:20   UGGAUCCUCCCCUACACUGG   1   ||||||*|*||||||||||| targets:353   ACCUAGAAAGGGAUGUGACC   372 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence	NA	coding protein	psRNATarget
AK105824.1	ncRNA:20   UGGAUCCUCCCCUACACUGG   1   *|=||*|||||||||||||= targets:334   UCUUAAGAGGGGAUGUGACU   353 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:001-203-D10, full insert sequence	NA	coding protein	psRNATarget
AK119759.1	ncRNA:20   UGGAUCCUCCCCUACACUGG   1   *|=||*|||||||||||||= targets:515   UCUUAAGAGGGGAUGUGACU   534 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:002-171-F12, full insert sequence	NA	coding protein	psRNATarget
XM_015779504.1	ncRNA:20   UGGAUCCUCCCCUACACUGG   1   *|=||*|||||||||||||= targets:1701   UCUUAAGAGGGGAUGUGACU   1720 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group copper methylamine oxidase (LOC4336153), mRNA	copper methylamine oxidase(LOC4336153)	coding protein	psRNATarget
AK111992.1	ncRNA:20   UGGAUCCUCCCCUACACUGG   1   |=|*|*|||||||||||||| targets:731   AUCCAAGAGGGGAUGUGACC   750 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:001-033-B02, full insert sequence	NA	coding protein	psRNATarget
XM_015789120.1	ncRNA:20   UGGAUCCUCCCCUACACUGG   1   |=|*|*|||||||||||||| targets:1292   AUCCAAGAGGGGAUGUGACC   1311 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group mitochondrial ubiquitin ligase activator of NFKB 1 (LOC4344112), transcript variant X2, mRNA	mitochondrial ubiquitin ligase activator of NFKB 1(LOC4344112)	coding protein	psRNATarget
XM_015789119.1	ncRNA:20   UGGAUCCUCCCCUACACUGG   1   |=|*|*|||||||||||||| targets:1387   AUCCAAGAGGGGAUGUGACC   1406 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group mitochondrial ubiquitin ligase activator of NFKB 1 (LOC4344112), transcript variant X1, mRNA	mitochondrial ubiquitin ligase activator of NFKB 1(LOC4344112)	coding protein	psRNATarget
AK102332.1	ncRNA:20   UGGAUCCUCCCCUACACUGG   1   |=|*|*|||||||||||||| targets:1791   AUCCAAGAGGGGAUGUGACC   1810 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:J033090N02, full insert sequence	NA	coding protein	psRNATarget