ncRNA ID | osa-miRf11519-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 22 |
Mature sequence(if miRNA) | NA - CAUUUUGUCAGGAAGUUCCGGG - NA |
Stem-loop(if miRNA) |
      CA       G    G         A     UG    UGCCCU GUCAGA  CCCGGAA UUCC GGCAAAAUG CCGGA  UUCC      G ||||||  ||||||| |||| ||||||||| |||||  |||| UAGUCU  GGGCCUU AAGG CUGUUUUAC GGCCU  AAGG      U       UC       G    A         A     UG    UCAGAA |
Stem-loop sequence | GUCAGACACCCGGAAGUUCCGGGCAAAAUGACCGGAUGUUCCUGCCCUGUAAGACUGGAAGUUCCGGACAUUUUGUCAGGAAGUUCCGGGCUUCUGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK101773.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J033064L16, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015762416.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group disease resistance protein RPM1 (LOC4350125), transcript variant X1, mRNA | disease resistance protein RPM1(LOC4350125) | coding protein | psRNATarget | |||||||||
XM_015762417.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group disease resistance protein RPM1 (LOC4350125), transcript variant X2, mRNA | disease resistance protein RPM1(LOC4350125) | coding protein | psRNATarget |