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BaseInfo

ncRNA ID ath-miRf10199-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - ACUCGACCUCUAGGUCGAGU - NA
Stem-loop(if miRNA)                         UCU      
CUACUCGACCUGGGGGUCGAGUGG   CUUCAGA
||||||||||||||||||||||||   ||||||U
GGUGAGCUGGAUCUCCAGCUCAUC   GAAGUUC
                        CUC      
Stem-loop sequence CUACUCGACCUGGGGGUCGAGUGGUCUCUUCAGAUCUUGAAGCUCCUACUCGACCUCUAGGUCGAGUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY227642.1
ncRNA:20   UGAGCUGGAUCUCCAGCUCA   1
  ||||*|||||||||||||||
targets:928   ACUCUACCUAGAGGUCGAGU   947

1.0 Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds NA coding protein psRNATarget
AY227642.1
ncRNA:20   UGAGCUGGAUCUCCAGCUCA   1
  ||||||||*|||||||||||
targets:765   ACUCGACCCAGAGGUCGAGU   784

1.5 Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds NA coding protein psRNATarget
EF183005.1
ncRNA:20   UGAGCUGGAUCUCCAGCUCA   1
  |||||||||*||||||||||
targets:1866   ACUCGACCUCGAGGUCGAGU   1885

1.5 Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence NA coding protein psRNATarget
EF183194.1
ncRNA:20   UGAGCUGGAUCUCCAGCUCA   1
  ||||*|||*|||||||||||
targets:577   ACUCUACCAAGAGGUCGAGU   596

2.5 Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence NA coding protein psRNATarget
EF183042.1
ncRNA:20   UGAGCUGGAUCUCCAGCUCA   1
  ||||*|||||||*|||||||
targets:1736   ACUCUACCUAGAAGUCGAGU   1755

2.5 Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence NA coding protein psRNATarget