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BaseInfo

ncRNA ID	osa-miRf11509-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - GAGCUGGAGCUCAGCCAAACAGG - NA
Stem-loop(if miRNA)	U  A           AC              CUCC CAAUU AG GCCUGUUUGGC  AGCUCUAGCUCUAG    A ||||| || |||||||||||  ||||||||||||||    C GUUAA UC CGGACAAACCG  UCGAGGUCGAGGUU    C      U  C           AC              CUCC
Stem-loop sequence	CAAUUUAGAGCCUGUUUGGCACAGCUCUAGCUCUAGCUCCACCCCUCUUGGAGCUGGAGCUCAGCCAAACAGGCCCUUAAUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK101220.1	ncRNA:23   GGACAAACCGACUCGAGGUCGAG   1   *|||||||||||||||||||||| targets:1186   ACUGUUUGGCUGAGCUCCAGCUC   1208 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J033031C20, full insert sequence	NA	coding protein	psRNATarget
XM_015768148.1	ncRNA:23   GGACAAACCGACUCGAGGUCGAG   1   *|||||||||||||||||||||| targets:1215   ACUGUUUGGCUGAGCUCCAGCUC   1237 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group chorismate mutase 2 (LOC4328508), mRNA	chorismate mutase 2(LOC4328508)	coding protein	psRNATarget
AK121068.1	ncRNA:23   GGACAAACCGACUCGAGGUCGAG   1   *||||||||=||||||||||||| targets:1313   ACUGUUUGGUUGAGCUCCAGCUC   1335 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J023061D24, full insert sequence	NA	coding protein	psRNATarget
XM_015790257.1	ncRNA:23   GGACAAACCGACUCGAGGUCGAG   1   *||||||||||||||||=||||| targets:1839   ACUGUUUGGCUGAGCUCUAGCUC   1861 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4342284 (LOC4342284), transcript variant X1, mRNA	uncharacterized LOC4342284(LOC4342284)	coding protein	psRNATarget
XM_015790258.1	ncRNA:23   GGACAAACCGACUCGAGGUCGAG   1   *||||||||||||||||=||||| targets:1936   ACUGUUUGGCUGAGCUCUAGCUC   1958 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4342284 (LOC4342284), transcript variant X2, mRNA	uncharacterized LOC4342284(LOC4342284)	coding protein	psRNATarget
AK102706.1	ncRNA:23   GGACAAACCGACUCGAGGUCGAG   1   *||||||||||||||||=||||| targets:2064   ACUGUUUGGCUGAGCUCUAGCUC   2086 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J033104A05, full insert sequence	NA	coding protein	psRNATarget
XM_015775467.1	ncRNA:23   GGACAAACCGACUCGAGGUCGAG   1   *=||||||||||||||||||||| targets:1944   AUUGUUUGGCUGAGCUCCAGCUC   1966 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group elongation of fatty acids protein 3-like (LOC4333830), mRNA	elongation of fatty acids protein 3-like(LOC4333830)	coding protein	psRNATarget
XM_015775467.1	ncRNA:23   GGACAAACCGACUCGAGGUCGAG   1   *||||||||||||||||||*||| targets:1422   ACUGUUUGGCUGAGCUCCAACUC   1444 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group elongation of fatty acids protein 3-like (LOC4333830), mRNA	elongation of fatty acids protein 3-like(LOC4333830)	coding protein	psRNATarget
AK068940.1	ncRNA:23   GGACAAACCGACUCGAGGUCGAG   1   *|||||||||||||||=|||||| targets:1365   ACUGUUUGGCUGAGCUUCAGCUC   1387 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013169D22, full insert sequence	NA	coding protein	psRNATarget