Search result

BaseInfo

ncRNA ID	osa-miRf11503-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	24
Mature sequence(if miRNA)	NA - UGGAGCUGGAACUUUGCCAAACAG - NA
Stem-loop(if miRNA)	GAAA         U   C           -AAA  GU     UUGUUUGGC AAG UCUAGCUCCAG    AG  A     ||||||||| ||| |||||||||||    ||     GACAAACCG UUC AGGUCGAGGUU    UC  A CUCA         U   A           GCGG  AA
Stem-loop sequence	GAAAUUGUUUGGCUAAGCUCUAGCUCCAGAAAAGGUAAAACUGGCGUUGGAGCUGGAACUUUGCCAAACAGACUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015766500.1	ncRNA:24   GACAAACCGUUUCAAGGUCGAGGU   1   ||||||||||*||*|||||||||| targets:1086   CUGUUUGGCACAGCUCCAGCUCCA   1109 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable staphylococcal-like nuclease CAN1 (LOC107276328), transcript variant X2, mRNA	probable staphylococcal-like nuclease CAN1(LOC107276328)	coding protein	psRNATarget
XM_015766499.1	ncRNA:24   GACAAACCGUUUCAAGGUCGAGGU   1   ||||||||||*||*|||||||||| targets:1095   CUGUUUGGCACAGCUCCAGCUCCA   1118 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable staphylococcal-like nuclease CAN1 (LOC107276328), transcript variant X1, mRNA	probable staphylococcal-like nuclease CAN1(LOC107276328)	coding protein	psRNATarget
XM_015760175.1	ncRNA:24   GACAAACCGUUUCAAGGUCGAGGU   1   ||||||||||*||*|||||||||| targets:730   CUGUUUGGCACAGCUCCAGCUCCA   753 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group F-box only protein 7 (LOC4350849), mRNA	F-box only protein 7(LOC4350849)	coding protein	psRNATarget
XM_015779315.1	ncRNA:24   GACAAACCGUUUCAAGGUCGAGGU   1   ||||||||||*||*|||||||||| targets:3688   CUGUUUGGCACAGCUCCAGCUCCA   3711 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group protein Rf1, mitochondrial (LOC9271155), mRNA	protein Rf1, mitochondrial(LOC9271155)	coding protein	psRNATarget
XM_015768499.1	ncRNA:24   GACAAACCGUUUCAAGGUCGAGGU   1   =|||||||||*||*|||||||||| targets:1074   UUGUUUGGCACAGCUCCAGCUCCA   1097 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group calcineurin B-like protein 8 (LOC107276173), transcript variant X2, mRNA	calcineurin B-like protein 8(LOC107276173)	coding protein	psRNATarget
XM_015768498.1	ncRNA:24   GACAAACCGUUUCAAGGUCGAGGU   1   =|||||||||*||*|||||||||| targets:1107   UUGUUUGGCACAGCUCCAGCUCCA   1130 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group calcineurin B-like protein 8 (LOC107276173), transcript variant X1, mRNA	calcineurin B-like protein 8(LOC107276173)	coding protein	psRNATarget
AK110528.1	ncRNA:24   GACAAACCGUUUCAAGGUCGAGGU   1   *|**||||*||||||||||||||| targets:732   AUUCUUGGAAAAGUUCCAGCUCCA   755 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:002-167-H12, full insert sequence	NA	coding protein	psRNATarget