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BaseInfo

ncRNA ID osa-miRf11502-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - GUGCCUCUAUCUGCAUUGCUG - NA
Stem-loop(if miRNA)    G          --A         -   A   ---    A   - GAUCGUGAGACCAUCGAGCUUGAGCU
UAG UCCAGCAGUG   AUGGAGGCG GCG CGC   GUCA CGA U                          U
||| ||||||||||   ||||||||| ||| |||   |||| ||| |
GUU AGGUCGUUAC   UAUCUCCGU CGC GCG   CGGG ACA C                          G
   G          GUC         G   -   AAA    -   G AAGGGAAGGUGUUCGCGGUCACGACA
Stem-loop sequence UAGGUCCAGCAGUGAAUGGAGGCGGCGACGCGUCAACGAUGAUCGUGAGACCAUCGAGCUUGAGCUUGACAGCACUGGCGCUUGUGGAAGGGAACGACAGGGCAAAGCGCGCGUGCCUCUAUCUGCAUUGCUGGAGUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015772283.1
ncRNA:21   GUCGUUACGUCUAUCUCCGUG   1
  |=|||||||||||=||||||*
targets:2503   CGGCAAUGCAGAUGGAGGCAA   2523

2.5 PREDICTED: Oryza sativa Japonica Group myosin-binding protein 3 (LOC4333867), transcript variant X1, mRNA myosin-binding protein 3(LOC4333867) coding protein psRNATarget
XM_015772284.1
ncRNA:21   GUCGUUACGUCUAUCUCCGUG   1
  |=|||||||||||=||||||*
targets:2504   CGGCAAUGCAGAUGGAGGCAA   2524

2.5 PREDICTED: Oryza sativa Japonica Group myosin-binding protein 3 (LOC4333867), transcript variant X2, mRNA myosin-binding protein 3(LOC4333867) coding protein psRNATarget
EU368698.1
ncRNA:21   GUCGUUACGUCUAUCUCCGUG   1
  |*|||||||||||=|||||||
targets:739   CUGCAAUGCAGAUGGAGGCAC   759

1.5 Oryza sativa Indica Group SKIP interacting protein 8 (SIP8) mRNA, partial cds NA coding protein psRNATarget
AK100246.1
ncRNA:21   GUCGUUACGUCUAUCUCCGUG   1
  |*|||||||||||=|||||||
targets:1536   CUGCAAUGCAGAUGGAGGCAC   1556

1.5 Oryza sativa Japonica Group cDNA clone:J023057O19, full insert sequence NA coding protein psRNATarget
XM_015759144.1
ncRNA:21   GUCGUUACGUCUAUCUCCGUG   1
  |*|||||||||||=|||||||
targets:1535   CUGCAAUGCAGAUGGAGGCAC   1555

1.5 PREDICTED: Oryza sativa Japonica Group myosin-binding protein 1 (LOC4348620), mRNA myosin-binding protein 1(LOC4348620) coding protein psRNATarget