ncRNA ID | osa-miRf11501-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 23 |
Mature sequence(if miRNA) | NA - GUGAUGCUUGCGAUGUAUCAGGU - NA |
Stem-loop(if miRNA) |
        U        CUAU          GCGAUU         -------   AG         G  -       A GUAUCAGG CCUGAUAC    CAGGUAUCAU      CUACCACGU       AUC  GUGAUACUU CA AGGUAUC G |||||||| ||||||||    ||||||||||      |||||||||       |||  ||||||||| || ||||||| CAUAGUCC GGACUAUG    GUUCGUAGUG      GGUGGUGCA       UAG  UACUAUGGA GU UCCAUAG A         U        UAGC          ------         CCAUUCU   CG         -  A       U |
Stem-loop sequence | GUAUCAGGUCCUGAUACCUAUCAGGUAUCAUGCGAUUCUACCACGUAUCAGGUGAUACUUGCAAGGUAUCAGAUGAUACCUAUGAGGUAUCAUGCGAUUCUUACCACGUGGUGGGUGAUGCUUGCGAUGUAUCAGGUCCUGAUAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK110723.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:002-170-E02, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK064711.1 |
|
3.0 | Oryza sativa Japonica Group cDNA clone:002-118-C06, full insert sequence | NA | coding protein | psRNATarget |