Search result

BaseInfo

ncRNA ID osa-miRf11499-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - CCGGUUGAUAUUACCAACCG - NA
Stem-loop(if miRNA)                    UUC                   ---UAUU   -AGUCC       U
UCUUUAGUCUUGGUUGGUG   UCAACCGGGACUAAAGAUA       UCU      CGGUUGG A
|||||||||||||||||||   |||||||||||||||||||       |||      ||||||| A
AGAAAUCAGGGCCAACCAU   AGUUGGCCUUGAUUUCUAU       AGA      GCCAACC U
                   UAU                   UAUCCCU   AAAAUA       A
Stem-loop sequence UCUUUAGUCUUGGUUGGUGUUCUCAACCGGGACUAAAGAUAUAUUUCUAGUCCCGGUUGGUAAUACCAACCGAUAAAAAGAUCCCUAUUAUCUUUAGUUCCGGUUGAUAUUACCAACCGGGACUAAAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288424.1
ncRNA:20   GCCAACCAUUAUAGUUGGCC   1
  ||||||||||||*|||||||
targets:1381   CGGUUGGUAAUACCAACCGG   1400

1.5 Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence NA coding protein psRNATarget
AK061057.1
ncRNA:20   GCCAACCAUUAUAGUUGGCC   1
  =|||||||||||*|||||||
targets:365   UGGUUGGUAAUACCAACCGG   384

1.5 Oryza sativa Japonica Group cDNA clone:006-205-H07, full insert sequence NA coding protein psRNATarget
AK288463.1
ncRNA:20   GCCAACCAUUAUAGUUGGCC   1
  ||||||||||*||||||||*
targets:612   CGGUUGGUAACAUCAACCGU   631

2.5 Oryza sativa Japonica Group cDNA, clone: J090036E20, full insert sequence NA coding protein psRNATarget