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BaseInfo

ncRNA ID ath-miRf10197-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 24
Mature sequence(if miRNA) NA - CACUCGACCAAGGGGGUCGAGUGA - NA
Stem-loop(if miRNA)    G AGA           -G            G G   GAGUGG G   A
GGU A   CACUCGACCUC  UGGUCGAGUGAU U AUC      U GUC G
||| |   |||||||||||  |||||||||||| | |||      | |||
CUA U   GUGAGCUGGGG  ACCAGCUCACUG A UAG      G UAG A
   G GUA           GA            A G   -----A G   A
Stem-loop sequence GGUGAAGACACUCGACCUCGUGGUCGAGUGAUGUGAUCGAGUGGUGGUCAGAAGAUGGAGAUGAAGUCACUCGACCAAGGGGGUCGAGUGAUGUGAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY231407.1
ncRNA:24   AGUGAGCUGGGGGAACCAGCUCAC   1
  ||||||||||*|||*|||||||||
targets:830   UCACUCGACCACCUGGGUCGAGUG   853

2.5 Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds NA coding protein psRNATarget