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BaseInfo

ncRNA ID	osa-miRf11487-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - GCCCGUCACAGAUGAGUCAUC - NA
Stem-loop(if miRNA)	C              G          C  - ACUAAUGCCC UAGGGCCCGU ACAGAUGAGUCAUC GUGAUGGGCU CA U          G |||||||||| |||||||||||||| |||||||||| || | AUCCCGGGCA UGUCUACUCAGUAG CACUGCCCGG CU A          A           A              G          A  U CAGUAGAGUU
Stem-loop sequence	UAGGGCCCGUCACAGAUGAGUCAUCGGUGAUGGGCUCCAUACUAAUGCCCGAUUGAGAUGACAUUCAGGCCCGUCACGGAUGACUCAUCUGUAACGGGCCCUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015761270.1	ncRNA:21   CUACUGAGUAGACACUGCCCG   1   ||||||||||||||||||||= targets:15   GAUGACUCAUCUGUGACGGGU   35 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9270068 (LOC9270068), mRNA	uncharacterized LOC9270068(LOC9270068)	coding protein	psRNATarget
AK119390.1	ncRNA:21   CUACUGAGUAGACACUGCCCG   1   |||||||||||*||||||||| targets:3076   GAUGACUCAUCAGUGACGGGC   3096 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:001-132-C09, full insert sequence	NA	coding protein	psRNATarget
AK068923.1	ncRNA:21   CUACUGAGUAGACACUGCCCG   1   |||||||||||*||||||||| targets:1232   GAUGACUCAUCAGUGACGGGC   1252 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013170A09, full insert sequence	NA	coding protein	psRNATarget
AK107543.1	ncRNA:21   CUACUGAGUAGACACUGCCCG   1   |||||*||||||*|||||||| targets:1582   GAUGAGUCAUCUAUGACGGGC   1602 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-129-H11, full insert sequence	NA	coding protein	psRNATarget
AK063612.1	ncRNA:21   CUACUG---AGUAGACACUGCCCG   1   *=||||---||||||||||||||| targets:909   AGUGACGGGUCAUCUGUGACGGGC   932 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:001-118-D05, full insert sequence	NA	coding protein	psRNATarget
AK063612.1	ncRNA:21   CUACUGAGUAGACACUGCCCG   1   |||||*||||||*|||||||| targets:950   GAUGAGUCAUCUCUGACGGGC   970 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-118-D05, full insert sequence	NA	coding protein	psRNATarget
AK288547.1	ncRNA:21   CUACUGAGUAGACACUGCCCG   1   |||*=*||||||||||||||| targets:159   GAUAGGUCAUCUGUGACGGGC   179 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J090046I18, full insert sequence	NA	coding protein	psRNATarget
AK288547.1	ncRNA:21   CUACUGAGUAGACACUGCCCG   1   *|**|*||||||||||||||| targets:3   CAGUAGUCAUCUGUGACGGGC   23 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J090046I18, full insert sequence	NA	coding protein	psRNATarget
XM_015779008.1	ncRNA:21   CUACUGAGUAGACACUGCCCG   1   |=||||*||*||||||||||| targets:1374   GGUGACCCACCUGUGACGGGC   1394 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280566 (LOC107280566), transcript variant X3, mRNA	uncharacterized LOC107280566(LOC107280566)	coding protein	psRNATarget
XM_015779007.1	ncRNA:21   CUACUGAGUAGACACUGCCCG   1   |=||||*||*||||||||||| targets:3244   GGUGACCCACCUGUGACGGGC   3264 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280566 (LOC107280566), transcript variant X2, mRNA	uncharacterized LOC107280566(LOC107280566)	coding protein	psRNATarget
XM_015779006.1	ncRNA:21   CUACUGAGUAGACACUGCCCG   1   |=||||*||*||||||||||| targets:3335   GGUGACCCACCUGUGACGGGC   3355 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280566 (LOC107280566), transcript variant X1, mRNA	uncharacterized LOC107280566(LOC107280566)	coding protein	psRNATarget