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BaseInfo

ncRNA ID	osa-miRf11486-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - GGCUCGUUAUCCUAACGAGCU - NA
Stem-loop(if miRNA)	-       UAU           CGA      -   CGG UC GGCUC GGCUCGU   CCUAACGAGCU   GGCUCG GCU   C  G ||||| |||||||   |||||||||||   |||||| |||   | UCGAG CCGAGCG   GGAUUGCUCGA   UCGAGC CGA   G  U      A       CUC           ---      U   -AA UU
Stem-loop sequence	GGCUCGGCUCGUUAUCCUAACGAGCUCGAGGCUCGGCUCGGCUCGUUUGAAAGCUCGAGCUAGCUCGUUAGGCUCGCGAGCCAGAGCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK109175.1	ncRNA:21   UCGAGCAAUCCUAUUGCUCGG   1   ||||||||||||||||||||| targets:560   AGCUCGUUAGGAUAACGAGCC   580 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:002-155-H10, full insert sequence	NA	coding protein	psRNATarget
XM_015793085.1	ncRNA:21   UCGAGCAAUCCUAUUGCUCGG   1   ||||||||||||||||||||| targets:558   AGCUCGUUAGGAUAACGAGCC   578 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107281835 (LOC107281835), transcript variant X1, mRNA	uncharacterized LOC107281835(LOC107281835)	coding protein	psRNATarget
XM_015793088.1	ncRNA:21   UCGAGCAAUCCUAUUGCUCGG   1   ||||||||||||||||||||| targets:570   AGCUCGUUAGGAUAACGAGCC   590 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107281835 (LOC107281835), transcript variant X3, mRNA	uncharacterized LOC107281835(LOC107281835)	coding protein	psRNATarget
XM_015757797.1	ncRNA:21   UCGAGCAAUCCUAUUGCUCGG   1   ||||||||||||||||||||| targets:539   AGCUCGUUAGGAUAACGAGCC   559 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group wall-associated receptor kinase 1 (LOC4347988), transcript variant X1, mRNA	wall-associated receptor kinase 1(LOC4347988)	coding protein	psRNATarget
XM_015779748.1	ncRNA:21   UCGAGCAAUCCUAUUGCUCGG   1   |||||||||||||||||||== targets:244   AGCUCGUUAGGAUAACGAGUU   264 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group cyclic dof factor 2 (LOC4324267), mRNA	cyclic dof factor 2(LOC4324267)	coding protein	psRNATarget
AF216531.1	ncRNA:21   UCGAGCAAUC-CUAUUGCUCGG   1   ||||||||||-||||||||||| targets:220   AGCUCGUUAGAGAUAACGAGCC   241 Target Full Sequence	3.0	Oryza sativa extensin-like proline-rich protein RiP-5 mRNA, partial cds	NA	coding protein	psRNATarget
AK069819.1	ncRNA:21   UCGAGCAAUC-CUAUUGCUCGG   1   ||||||||||-||||||||||| targets:1424   AGCUCGUUAGAGAUAACGAGCC   1445 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:J023026N18, full insert sequence	NA	coding protein	psRNATarget
AK107074.1	ncRNA:21   UCGAGCAAUCCUAUUGCUCGG   1   ||||||||*|||||||||||| targets:603   AGCUCGUUUGGAUAACGAGCC   623 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:002-121-F02, full insert sequence	NA	coding protein	psRNATarget
XM_015784040.1	ncRNA:21   UCGAGCAAUCCUAUUGCUCGG   1   ||||||||*|||||||||||| targets:300   AGCUCGUUUGGAUAACGAGCC   320 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group hypersensitive-induced response protein 1 (LOC4339791), transcript variant X2, mRNA	hypersensitive-induced response protein 1(LOC4339791)	coding protein	psRNATarget
AK288737.1	ncRNA:21   UCGAGCAAUCCUAUUGCUCGG   1   |||||*||||||||||||||| targets:1919   AGCUCAUUAGGAUAACGAGCC   1939 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090063M20, full insert sequence	NA	coding protein	psRNATarget
XM_015771083.1	ncRNA:21   UCGAGCAAUCCUAUUGCUCGG   1   ||||||||||*|||||||||= targets:187   AGCUCGUUAGAAUAACGAGCU   207 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable purine permease 11 (LOC4330368), transcript variant X1, mRNA	probable purine permease 11(LOC4330368)	coding protein	psRNATarget
AK065336.1	ncRNA:21   UCGAGCAAUCCUAUUGCUCGG   1   ||||||||||*|||||||||= targets:559   AGCUCGUUAGAAUAACGAGCU   579 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013000O22, full insert sequence	NA	coding protein	psRNATarget