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BaseInfo

ncRNA ID osa-miRf11481-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - GUGUCAUCUGUGACGGGCUCC - NA
Stem-loop(if miRNA)                         UCCA      -GGCC GA
AGAUGAGUGUCAUCUGUGACGGGC    ACUAGA     C  U
||||||||||||||||||||||||    ||||||     |
UUUACUCACAGUAGACACUGCCCG    UGAUUU     G  U
                        ----      GAAUA AG
Stem-loop sequence AGAUGAGUGUCAUCUGUGACGGGCUCCAACUAGAGGCCCGAUUGAGAUAAGUUUAGUGCCCGUCACAGAUGACACUCAUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288447.1
ncRNA:21   CCUCGGGCAGUGUCUACUGUG   1
  ||||||||||||*||||||||
targets:471   GGAGCCCGUCACCGAUGACAC   491

1.5 Oryza sativa Japonica Group cDNA, clone: J090034N03, full insert sequence NA coding protein psRNATarget
JB164315.1
ncRNA:21   CCUCGGGCAGUGUCUACUGUG   1
  **|||||||||||||||||*=
targets:83   AAAGCCCGUCACAGAUGACUU   103

2.5 Sequence 1979 from Patent EP2559767 NA coding protein psRNATarget
LQ235984.1
ncRNA:21   CCUCGGGCAGUGUCUACUGUG   1
  **|||||||||||||||||*=
targets:83   AAAGCCCGUCACAGAUGACUU   103

2.5 Sequence 1979 from Patent EP2985353 NA coding protein psRNATarget
HI403854.1
ncRNA:21   CCUCGGGCAGUGUCUACUGUG   1
  **|||||||||||||||||*=
targets:83   AAAGCCCGUCACAGAUGACUU   103

2.5 Sequence 1979 from Patent EP2074227 NA coding protein psRNATarget
HI403775.1
ncRNA:21   CCUCGGGCAGUGUCUACUGUG   1
  **|||||||||||||||||*=
targets:88   AAAGCCCGUCACAGAUGACUU   108

2.5 Sequence 1900 from Patent EP2074227 NA coding protein psRNATarget
LQ235905.1
ncRNA:21   CCUCGGGCAGUGUCUACUGUG   1
  **|||||||||||||||||*=
targets:88   AAAGCCCGUCACAGAUGACUU   108

2.5 Sequence 1900 from Patent EP2985353 NA coding protein psRNATarget
JB164236.1
ncRNA:21   CCUCGGGCAGUGUCUACUGUG   1
  **|||||||||||||||||*=
targets:88   AAAGCCCGUCACAGAUGACUU   108

2.5 Sequence 1900 from Patent EP2559767 NA coding protein psRNATarget
AK068923.1
ncRNA:21   CCUCGGGCAGUGUCUACUGUG   1
  **=||||||||||||||||*|
targets:1219   UAGGCCCGUCACAGAUGACUC   1239

2.5 Oryza sativa Japonica Group cDNA clone:J013170A09, full insert sequence NA coding protein psRNATarget
AK119390.1
ncRNA:21   CCUCGGGCAGUGUCUACUGUG   1
  **|||||*||||=||||||||
targets:2958   UAAGCCCAUCACGGAUGACAC   2978

2.5 Oryza sativa Japonica Group cDNA clone:001-132-C09, full insert sequence NA coding protein psRNATarget
AK242836.1
ncRNA:21   CCUCGGGCAGUGUCUACUGUG   1
  **|||=|*|||||||||||||
targets:872   CAAGCUCCUCACAGAUGACAC   892

2.0 Oryza sativa Japonica Group cDNA, clone: J090069F13, full insert sequence NA coding protein psRNATarget