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BaseInfo

ncRNA ID	osa-miRf11478-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - UCCUGGUUGGUGUUACCAACCG - NA
Stem-loop(if miRNA)	U                U            C     --    -----               UU  UUACUCCUGGUUGGUG UACCAACCGGGA UAAAG  UGAU     CUUUAGUCCCGGUUG  G  |||||||||||||||| |||||||||||| |||||  ||||     |||||||||||||||  U  AAUGAGGACCAACCAU AUGGUUGGCCCU AUUUC  GCUA     GAAAUCGGGGCCAAC  U A                U            A     UA    UAUUU               UU
Stem-loop sequence	UUUACUCCUGGUUGGUGUUACCAACCGGGACUAAAGUGAUCUUUAGUCCCGGUUGUUGUUUUCAACCGGGGCUAAAGUUUAUAUCGAUCUUUAAUCCCGGUUGGUAUUACCAACCAGGAGUAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015779829.1	ncRNA:22   GCCAACCAUUGUGGUUGGUCCU   1   |||||||||||||||||||||| targets:1712   CGGUUGGUAACACCAACCAGGA   1733 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4335182 (LOC4335182), mRNA	uncharacterized LOC4335182(LOC4335182)	coding protein	psRNATarget
XM_015779829.1	ncRNA:22   GCCAACCAUUGUGGUUGGUCCU   1   |||||||*||||||||||=||| targets:1756   CGGUUGGGAACACCAACCGGGA   1777 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4335182 (LOC4335182), mRNA	uncharacterized LOC4335182(LOC4335182)	coding protein	psRNATarget
AK242216.1	ncRNA:22   GCCAACCAUUGUGGUUGGUCCU   1   ||||||||||||||||||=||| targets:670   CGGUUGGUAACACCAACCGGGA   691 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J075172F09, full insert sequence	NA	coding protein	psRNATarget
AK121472.1	ncRNA:22   GCCAACCAUUGUGGUUGGUCCU   1   ||||||||||||||||||=||| targets:2072   CGGUUGGUAACACCAACCGGGA   2093 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023148H10, full insert sequence	NA	coding protein	psRNATarget
AK288438.1	ncRNA:22   GCCAACCAUUGUGGUUGGUCCU   1   ||||||||||||||||||=||| targets:1323   CGGUUGGUAACACCAACCGGGA   1344 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090034C21, full insert sequence	NA	coding protein	psRNATarget
AK288734.1	ncRNA:22   GCCAACCAUUGUGGUUGGUCCU   1   ||||||||||||||||||=||| targets:59   CGGUUGGUAACACCAACCGGGA   80 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090063I24, full insert sequence	NA	coding protein	psRNATarget
XM_015758676.1	ncRNA:22   GCCAACCAUUGUGGUUGGUCCU   1   |||||*||||||||||||=||| targets:1990   CGGUUAGUAACACCAACCGGGA   2011 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group polyubiquitin-like (LOC107279205), mRNA	polyubiquitin-like(LOC107279205)	coding protein	psRNATarget
AK288463.1	ncRNA:22   GCCAACCAUUGUGGUUGGUCCU   1   ||||||||=*|||||||||||| targets:567   CGGUUGGUGUCACCAACCAGGA   588 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090036E20, full insert sequence	NA	coding protein	psRNATarget
AK121178.1	ncRNA:22   GCCAACCAUUGUGGUUGGUCCU   1   =|||||||||||||||||*||| targets:1947   UGGUUGGUAACACCAACCCGGA   1968 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023083G22, full insert sequence	NA	coding protein	psRNATarget
AK288624.1	ncRNA:22   GCCAACCAUUGUGGUUGGUCCU   1   =|||||||||||||||||||*| targets:5008   UGGUUGGUAACACCAACCAGAA   5029 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090054H14, full insert sequence	NA	coding protein	psRNATarget
AK066662.1	ncRNA:22   GCCAACCAUUGUGGUUGGUCCU   1   |||||*|||*|||||||||||| targets:667   CGGUUCGUAUCACCAACCAGGA   688 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013071A17, full insert sequence	NA	coding protein	psRNATarget
AK065811.1	ncRNA:22   GCCAACCAUUGUGGUUGGUCCU   1   **|||**|*||||||||||||| targets:1948   AAGUUCUUUACACCAACCAGGA   1969 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:J013039F07, full insert sequence	NA	coding protein	psRNATarget