ncRNA ID | osa-miRf11475-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 22 |
Mature sequence(if miRNA) | NA - UCGGUGACAAGAUGAGGGACCU - NA |
Stem-loop(if miRNA) |
UUUUAUAA            A G        CC   A          AAAUUAAAAC  UCUCGGCUUUCCCAGUUUUGUGA         CUCGGUGACAAG U AGGGACCU  GGU UACUUUUUCC          GC                       G         |||||||||||| | ||||||||  ||| ||||||||||          ||                       A         GGGCUACUGUUC A UCCCUGGA  CCA AUGAAAAAGG          AG                       G --AAAAUA            A G        AA   C          ----------  CACCUUUGUUUCGGGUUACGUAA |
Stem-loop sequence | UUUUAUAACUCGGUGACAAGAUGAGGGACCUCCGGUAUACUUUUUCCAAAUUAAAACGCUCUCGGCUUUCCCAGUUUUGUGAGAGAAUGCAUUGGGCUUUGUUUCCACGAGGAAAAAGUACACCAAAGGUCCCUGAACUUGUCAUCGGGAUAAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015771703.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4324098 (LOC4324098), mRNA | uncharacterized LOC4324098(LOC4324098) | coding protein | psRNATarget | |||||||||
AK240808.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J065006I23, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015760579.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 (LOC4350311), mRNA | G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300(LOC4350311) | coding protein | psRNATarget |