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BaseInfo

ncRNA ID osa-miRf11475-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - UCGGUGACAAGAUGAGGGACCU - NA
Stem-loop(if miRNA) UUUUAUAA            A G        CC   A          AAAUUAAAAC  UCUCGGCUUUCCCAGUUUUGUGA
        CUCGGUGACAAG U AGGGACCU  GGU UACUUUUUCC          GC                       G
        |||||||||||| | ||||||||  ||| ||||||||||          ||                       A
        GGGCUACUGUUC A UCCCUGGA  CCA AUGAAAAAGG          AG                       G
--AAAAUA            A G        AA   C          ----------  CACCUUUGUUUCGGGUUACGUAA
Stem-loop sequence UUUUAUAACUCGGUGACAAGAUGAGGGACCUCCGGUAUACUUUUUCCAAAUUAAAACGCUCUCGGCUUUCCCAGUUUUGUGAGAGAAUGCAUUGGGCUUUGUUUCCACGAGGAAAAAGUACACCAAAGGUCCCUGAACUUGUCAUCGGGAUAAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015771703.1
ncRNA:22   UCCAGGGAGUAGAACAGUGGCU   1
  ||||||||||*|||||||||||
targets:246   AGGUCCCUCAACUUGUCACCGA   267

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4324098 (LOC4324098), mRNA uncharacterized LOC4324098(LOC4324098) coding protein psRNATarget
AK240808.1
ncRNA:22   UCCAGGGAGUAGAACAGUGGCU   1
  ||*|||=|||||||||||=|||
targets:316   AGCUCCUUCAUCUUGUCAUCGA   337

2.5 Oryza sativa Japonica Group cDNA, clone: J065006I23, full insert sequence NA coding protein psRNATarget
XM_015760579.1
ncRNA:22   UCCAGGGAGUAGAACAGUGGCU   1
  ||||||||*|*|||||||||||
targets:14   AGGUCCCUGAACUUGUCACCGA   35

2.5 PREDICTED: Oryza sativa Japonica Group G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 (LOC4350311), mRNA G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300(LOC4350311) coding protein psRNATarget