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BaseInfo

ncRNA ID osa-miRf11471-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - UCAGUGAUAAAGGCACGGUGCA - NA
Stem-loop(if miRNA)    A                        C     CACAU    A     - G
CAU UCAGUGAUAAAGGCACGGUGCAGU GACUG     GAUC UAAUC C A
||| |||||||||||||||||||||||| |||||     |||| ||||| | G
GUA AGUCACUGUUUUUGUGCCACGUUA UUGAC     CUAG GUUAG G G
   C                        -     AUCUC    A     A A
Stem-loop sequence CAUAUCAGUGAUAAAGGCACGGUGCAGUCGACUGCACAUGAUCAUAAUCCGAGGAGAGAUUGAGAUCCUCUACAGUUAUUGCACCGUGUUUUUGUCACUGACAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015784699.1
ncRNA:22   ACGUGGCACGGAAAUAGUGACU   1
  ||||||||||||||=|||||||
targets:2694   UGCACCGUGCCUUUGUCACUGA   2715

1.5 PREDICTED: Oryza sativa Japonica Group protein NRT1/ PTR FAMILY 3.1-like (LOC107276905), mRNA protein NRT1/ PTR FAMILY 3.1-like(LOC107276905) coding protein psRNATarget
AK119370.1
ncRNA:22   ACGUGGCACGGAAAUAGUGACU   1
  ||||=||||=||||||||||||
targets:1747   UGCAUCGUGUCUUUAUCACUGA   1768

2.5 Oryza sativa Japonica Group cDNA clone:001-131-H09, full insert sequence NA coding protein psRNATarget