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BaseInfo

ncRNA ID ath-miRf10195-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 25
Mature sequence(if miRNA) NA - UCUACUCGACUAGGGGGUCGAGUGU - NA
Stem-loop(if miRNA) UG     GAA           AUGG          -    G G  
  GAGAU   GAUACUCGACC    GGUCGAGUGG UGGU U AUG
  |||||   |||||||||||    |||||||||| |||| | ||U
  UUCUG   UUGUGAGCUGG    UCAGCUCAUC ACCG A UAG
AG     ---           GGGA          U    G G  
Stem-loop sequence UGGAGAUGAAGAUACUCGACCAUGGGGUCGAGUGGUGGUGUGAUGUGAUGAGGCCAUCUACUCGACUAGGGGGUCGAGUGUUGUCUUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183192.1
ncRNA:25   UGUGAGCUGGGGGAUCAGCUCAUCU   1
  *|||||||||||||=||||||||||
targets:124   CCACUCGACCCCCUGGUCGAGUAGA   148

1.5 Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence NA coding protein psRNATarget
EF183193.1
ncRNA:25   UGUGAGCUGGGGGAUCAGCUCAUCU   1
  *|||||||||||||=||||||||||
targets:499   CCACUCGACCCCCUGGUCGAGUAGA   523

1.5 Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence NA coding protein psRNATarget
EF183191.1
ncRNA:25   UGUGAGCUGGGGGAUCAGCUCAUCU   1
  *|||||||||||||=||||||||||
targets:499   CCACUCGACCCCCUGGUCGAGUAGA   523

1.5 Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence NA coding protein psRNATarget
EF183042.1
ncRNA:25   UGUGAGCUGGGGGAUCAGCUCAUCU   1
  *|||||||||||||=||||||||||
targets:1571   UCACUCGACCCCCUGGUCGAGUAGA   1595

1.5 Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence NA coding protein psRNATarget
AY231407.1
ncRNA:25   UGUGAGCUGGGGGAUCAGCUCAUCU   1
  *|||||||||||||||||*||||||
targets:444   CCACUCGACCCCCUAGUCAAGUAGA   468

1.5 Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds NA coding protein psRNATarget
DQ069808.1
ncRNA:25   UGUGAGCUGGGGGAUCAGCUCAUCU   1
  *|||||||||||||=|||||||||*
targets:90   CCACUCGACCCCCUGGUCGAGUAGC   114

2.5 Arabidopsis thaliana At2g10880 mRNA, partial sequence NA coding protein psRNATarget